Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.24■□□□□ 0.67
NpcdF8VQB8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NpcdF8VQB8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.22■□□□□ 0.67
NpcdF8VQB8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NpcdF8VQB8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.21■□□□□ 0.67
NpcdF8VQB8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.21■□□□□ 0.67
NpcdF8VQB8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Gm44492-201ENSMUST00000197012 141 ntBASIC19.21■□□□□ 0.67
NpcdF8VQB8 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.21■□□□□ 0.67
NpcdF8VQB8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NpcdF8VQB8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NpcdF8VQB8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.19■□□□□ 0.66
NpcdF8VQB8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.19■□□□□ 0.66
NpcdF8VQB8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms