Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Colca2F8VPY8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Colca2F8VPY8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Colca2F8VPY8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Colca2F8VPY8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Rpph1-201ENSMUST00000175096 319 ntBASIC15.15■□□□□ 0.02
Colca2F8VPY8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.15■□□□□ 0.02
Colca2F8VPY8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.15■□□□□ 0.02
Colca2F8VPY8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.14■□□□□ 0.01
Colca2F8VPY8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Colca2F8VPY8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.13■□□□□ 0.01
Colca2F8VPY8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Gm18246-201ENSMUST00000221023 728 ntBASIC15.13■□□□□ 0.01
Colca2F8VPY8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Colca2F8VPY8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm22065-201ENSMUST00000103753 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm22066-201ENSMUST00000103761 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm24932-201ENSMUST00000103763 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm24115-201ENSMUST00000103799 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm22190-201ENSMUST00000103827 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm22191-201ENSMUST00000103831 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm24721-201ENSMUST00000103849 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm28018-201ENSMUST00000103869 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm26399-201ENSMUST00000103937 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm25349-201ENSMUST00000177728 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm23616-201ENSMUST00000177797 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm25871-201ENSMUST00000177816 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm24752-201ENSMUST00000178240 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm24496-201ENSMUST00000178287 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm25649-201ENSMUST00000178476 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm25548-201ENSMUST00000178681 110 ntBASIC15.12■□□□□ 0.01
Colca2F8VPY8 Gm23147-201ENSMUST00000178841 110 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms