Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Gm715-201ENSMUST00000117865 831 ntBASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Gm21814-202ENSMUST00000203277 873 ntBASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh1F7BJK1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh1F7BJK1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh1F7BJK1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh1F7BJK1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh1F7BJK1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh1F7BJK1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Gm7370-201ENSMUST00000219471 767 ntBASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh1F7BJK1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms