Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Gm5643-201ENSMUST00000117081 966 ntBASIC11.19□□□□□ -0.62
Gm10542F6XDR3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm10542F6XDR3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Gm7791-201ENSMUST00000219066 539 ntBASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm10542F6XDR3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Gm12527-201ENSMUST00000117967 564 ntBASIC11.17□□□□□ -0.62
Gm10542F6XDR3 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Actl10-202ENSMUST00000226583 1501 ntBASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm10542F6XDR3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10542F6XDR3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10542F6XDR3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm10542F6XDR3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms