Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc188F6WEU2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm45384-201ENSMUST00000210451 277 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Syt7-204ENSMUST00000223586 1344 ntBASIC16.17■□□□□ 0.18
Ccdc188F6WEU2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Gm36967-201ENSMUST00000193814 266 ntBASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc188F6WEU2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Gm18246-201ENSMUST00000221023 728 ntBASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc188F6WEU2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Gm12859-201ENSMUST00000117834 427 ntBASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Gm16198-201ENSMUST00000118766 670 ntBASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Gm13829-201ENSMUST00000119600 138 ntBASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc188F6WEU2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Gm11478-201ENSMUST00000117851 599 ntBASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.13■□□□□ 0.17
Ccdc188F6WEU2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms