Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cpsf4lE9Q2N0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cpsf4lE9Q2N0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cpsf4lE9Q2N0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cpsf4lE9Q2N0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cpsf4lE9Q2N0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cpsf4lE9Q2N0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Gm44454-201ENSMUST00000198541 138 ntBASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cpsf4lE9Q2N0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpsf4lE9Q2N0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms