Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm8097-201ENSMUST00000117903 829 ntBASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd3B1AR17 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd3B1AR17 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd3B1AR17 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Gm27646-201ENSMUST00000183989 110 ntBASIC15.66■□□□□ 0.1
Chd3B1AR17 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Gm5364-201ENSMUST00000216789 889 ntBASIC15.66■□□□□ 0.1
Chd3B1AR17 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Haglr-201ENSMUST00000100000 2085 ntBASIC15.66■□□□□ 0.1
Chd3B1AR17 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Chd3B1AR17 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.66■□□□□ 0.1
Chd3B1AR17 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd3B1AR17 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd3B1AR17 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.65■□□□□ 0.1
Chd3B1AR17 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Gm8344-201ENSMUST00000119813 856 ntBASIC15.65■□□□□ 0.1
Chd3B1AR17 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.65■□□□□ 0.1
Chd3B1AR17 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.65■□□□□ 0.1
Chd3B1AR17 Gm8655-201ENSMUST00000221159 852 ntBASIC15.65■□□□□ 0.1
Chd3B1AR17 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.65■□□□□ 0.1
Chd3B1AR17 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chd3B1AR17 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd3B1AR17 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Chd3B1AR17 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Chd3B1AR17 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Chd3B1AR17 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chd3B1AR17 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd3B1AR17 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd3B1AR17 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms