Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.06□□□□□ -0.48
Col6a5A6H584 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a5A6H584 Gm9682-201ENSMUST00000197505 556 ntBASIC12.06□□□□□ -0.48
Col6a5A6H584 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a5A6H584 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.06□□□□□ -0.48
Col6a5A6H584 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col6a5A6H584 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a5A6H584 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.06□□□□□ -0.48
Col6a5A6H584 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.06□□□□□ -0.48
Col6a5A6H584 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col6a5A6H584 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col6a5A6H584 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col6a5A6H584 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.05□□□□□ -0.48
Col6a5A6H584 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.05□□□□□ -0.48
Col6a5A6H584 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a5A6H584 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.05□□□□□ -0.48
Col6a5A6H584 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.05□□□□□ -0.48
Col6a5A6H584 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col6a5A6H584 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.05□□□□□ -0.48
Col6a5A6H584 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.05□□□□□ -0.48
Col6a5A6H584 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col6a5A6H584 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col6a5A6H584 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.04□□□□□ -0.48
Col6a5A6H584 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Gm18827-201ENSMUST00000188341 790 ntBASIC12.04□□□□□ -0.48
Col6a5A6H584 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.04□□□□□ -0.48
Col6a5A6H584 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Mir6404-201ENSMUST00000183699 94 ntBASIC12.04□□□□□ -0.48
Col6a5A6H584 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col6a5A6H584 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.04□□□□□ -0.48
Col6a5A6H584 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col6a5A6H584 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm15824-201ENSMUST00000119516 955 ntBASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm25144-201ENSMUST00000179561 110 ntBASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm25352-201ENSMUST00000179815 110 ntBASIC12.03□□□□□ -0.48
Col6a5A6H584 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Col6a5A6H584 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm2810-201ENSMUST00000118681 990 ntBASIC12.03□□□□□ -0.48
Col6a5A6H584 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.03□□□□□ -0.48
Col6a5A6H584 Gm45331-201ENSMUST00000209868 554 ntBASIC12.03□□□□□ -0.48
Col6a5A6H584 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col6a5A6H584 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms