Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.49□□□□□ -0.25
Col6a4A2AX52 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a4A2AX52 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.48□□□□□ -0.25
Col6a4A2AX52 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.48□□□□□ -0.25
Col6a4A2AX52 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.48□□□□□ -0.25
Col6a4A2AX52 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col6a4A2AX52 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Gm23547-201ENSMUST00000158210 271 ntBASIC13.47□□□□□ -0.25
Col6a4A2AX52 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.47□□□□□ -0.25
Col6a4A2AX52 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a4A2AX52 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a4A2AX52 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.46□□□□□ -0.26
Col6a4A2AX52 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Gm8396-201ENSMUST00000057361 823 ntBASIC13.46□□□□□ -0.26
Col6a4A2AX52 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col6a4A2AX52 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a4A2AX52 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.45□□□□□ -0.26
Col6a4A2AX52 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms