Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc112A0AUP1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Gm18959-201ENSMUST00000208954 655 ntBASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc112A0AUP1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc112A0AUP1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc112A0AUP1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc112A0AUP1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc112A0AUP1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms