Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.32□□□□□ -0.44
Trbv17A0A140T8P8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Gm9013-201ENSMUST00000132939 882 ntBASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Gm25016-201ENSMUST00000158399 131 ntBASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv17A0A140T8P8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Mir770-201ENSMUST00000103252 94 ntBASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 AA414768-201ENSMUST00000121924 1257 ntBASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Gm6659-201ENSMUST00000174752 547 ntBASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv17A0A140T8P8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv17A0A140T8P8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms