Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav9d-4A0A0G2JG37 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm24841-201ENSMUST00000158676 357 ntBASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm10517-202ENSMUST00000192970 758 ntBASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav9d-4A0A0G2JG37 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm42545-201ENSMUST00000202755 922 ntBASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9d-4A0A0G2JG37 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Dio3-201ENSMUST00000097228 1449 ntBASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9d-4A0A0G2JG37 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms