Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav23A0A0G2JG17 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav23A0A0G2JG17 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Trav23A0A0G2JG17 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Gm44450-201ENSMUST00000199528 114 ntBASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav23A0A0G2JG17 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav23A0A0G2JG17 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav23A0A0G2JG17 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms