Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm4974-201ENSMUST00000209974 875 ntBASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3n-3A0A0G2JEM0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms