Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav19A0A0B4J1K4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Asic1-205ENSMUST00000228185 1818 ntBASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav19A0A0B4J1K4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Gm18115-201ENSMUST00000221209 621 ntBASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav19A0A0B4J1K4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav19A0A0B4J1K4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Gm12527-201ENSMUST00000117967 564 ntBASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Gm16042-201ENSMUST00000204813 1247 ntBASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav19A0A0B4J1K4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms