Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav4-3A0A0B4J1K1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4-3A0A0B4J1K1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.95□□□□□ -0.66
Trav4-3A0A0B4J1K1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms