Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv1A0A0B4J1G7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv1A0A0B4J1G7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv1A0A0B4J1G7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv1A0A0B4J1G7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv1A0A0B4J1G7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv1A0A0B4J1G7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm715-201ENSMUST00000117865 831 ntBASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv1A0A0B4J1G7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Odf3b-204ENSMUST00000227834 930 ntBASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv1A0A0B4J1G7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv1A0A0B4J1G7 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms