Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm36967-201ENSMUST00000193814 266 ntBASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm44450-201ENSMUST00000199528 114 ntBASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sirpb1aA0A0A6YYP6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms