Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Gm13158-201ENSMUST00000122007 736 ntBASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Gm37292-201ENSMUST00000192062 758 ntBASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-5A0A075B6B5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Gm13148-201ENSMUST00000118892 745 ntBASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Il3ra-202ENSMUST00000223589 738 ntBASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-5A0A075B6B5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-5A0A075B6B5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 BC037039-201ENSMUST00000192003 2205 ntBASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-5A0A075B6B5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms