Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6n-6A0A075B6B2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm24841-201ENSMUST00000158676 357 ntBASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6n-6A0A075B6B2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm12085-201ENSMUST00000119263 940 ntBASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm27463-201ENSMUST00000183569 57 ntBASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm38027-201ENSMUST00000192315 235 ntBASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6n-6A0A075B6B2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.98□□□□□ -0.49
Trav6n-6A0A075B6B2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms