Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 App-207ENSMUST00000227737 2827 ntBASIC12.43□□□□□ -0.42
Trav9d-1A0A075B699 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gm11336-201ENSMUST00000118168 334 ntBASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gm16061-201ENSMUST00000122167 857 ntBASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-1A0A075B699 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Gm13474-201ENSMUST00000122466 815 ntBASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-1A0A075B699 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-1A0A075B699 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-1A0A075B699 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-1A0A075B699 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-1A0A075B699 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-1A0A075B699 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-1A0A075B699 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms