Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Gm18666-201ENSMUST00000190039 958 ntBASIC12.45□□□□□ -0.42
Trav16A0A075B653 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16A0A075B653 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.44□□□□□ -0.42
Trav16A0A075B653 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16A0A075B653 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.43□□□□□ -0.42
Trav16A0A075B653 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gm27275-201ENSMUST00000184318 272 ntBASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gm43183-201ENSMUST00000200632 547 ntBASIC12.43□□□□□ -0.42
Trav16A0A075B653 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16A0A075B653 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16A0A075B653 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms