Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-2-dv6-2A0A075B650 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Sybu-209ENSMUST00000228639 4113 ntBASIC13.15□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm36967-201ENSMUST00000193814 266 ntBASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm44450-201ENSMUST00000199528 114 ntBASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms