Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Spsb2-203ENSMUST00000112473 1322 ntBASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-4A0A075B631 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Sybu-209ENSMUST00000228639 4113 ntBASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-4A0A075B631 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Gm37055-201ENSMUST00000191866 133 ntBASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Gm18421-201ENSMUST00000204122 625 ntBASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav9n-4A0A075B631 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav9n-4A0A075B631 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms