Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm27463-201ENSMUST00000183569 57 ntBASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Sybu-209ENSMUST00000228639 4113 ntBASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15d-1-dv6d-1A0A075B624 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms