Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7n-4A0A075B620 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Gm10493-201ENSMUST00000097270 612 ntBASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7n-4A0A075B620 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7n-4A0A075B620 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Gm10033-202ENSMUST00000211874 928 ntBASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7n-4A0A075B620 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Gm26524-201ENSMUST00000192339 390 ntBASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7n-4A0A075B620 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7n-4A0A075B620 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms