Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC244505.4-201ENST00000434905 287 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 SSXP5-201ENST00000443473 287 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 AL021397.1-201ENST00000451806 248 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 RNA5SP282-201ENST00000516355 108 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 AC008507.4-201ENST00000585464 127 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 AL121890.5-201ENST00000620848 304 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 MIR6079-201ENST00000635807 62 ntBASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TNFRSF11AQ9Y6Q6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AL136360.1-201ENST00000503377 1900 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SNORA63.4-201ENST00000362763 126 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNA5SP68-201ENST00000363885 119 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 Y_RNA.253-201ENST00000364562 112 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-309P-201ENST00000364573 106 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SNORA67.4-201ENST00000384688 142 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-1186P-201ENST00000410429 97 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNA5SP136-201ENST00000410906 107 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 NDUFA4P2-201ENST00000489989 244 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MRPS17P9-201ENST00000511924 393 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-991P-201ENST00000516168 107 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNA5SP320-201ENST00000516263 124 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNA5SP148-201ENST00000516527 94 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR3613-201ENST00000579844 87 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR338-201ENST00000636369 67 ntBASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFRSF11AQ9Y6Q6 ZNF271P-202ENST00000465539 1970 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-743P-201ENST00000364151 106 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 EDDM3CP-201ENST00000415977 425 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 FTH1P12-201ENST00000432137 551 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 Y_RNA.651-201ENST00000459380 103 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RN7SL297P-201ENST00000483161 293 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SNORD33.1-201ENST00000516213 88 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SNORA9.3-201ENST00000516383 129 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-412P-201ENST00000516434 106 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU7-128P-201ENST00000517247 62 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AP002004.2-201ENST00000531656 154 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC108081.1-201ENST00000604358 221 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC025166.1-201ENST00000612411 163 ntBASIC3.2□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR4435-1-201ENST00000582552 80 ntBASIC3.19□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR6817-201ENST00000615588 66 ntBASIC3.19□□□□□ -1.9
TNFRSF11AQ9Y6Q6 U4atac.1-201ENST00000618345 95 ntBASIC3.19□□□□□ -1.9
TNFRSF11AQ9Y6Q6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFRSF11AQ9Y6Q6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNA5SP210-201ENST00000391034 120 ntBASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 CST2P1-201ENST00000425770 87 ntBASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC099677.2-201ENST00000436385 175 ntBASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SNRPGP13-201ENST00000442212 177 ntBASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNA5SP236-201ENST00000516169 116 ntBASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF11AQ9Y6Q6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 Y_RNA.410-201ENST00000383992 113 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-160P-201ENST00000384591 107 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 Y_RNA.630-201ENST00000411370 108 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC233266.1-201ENST00000454518 96 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 Y_RNA.649-201ENST00000459077 103 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 RNU6-667P-201ENST00000517186 102 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR3129-201ENST00000581095 76 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC242852.1-201ENST00000612151 96 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC244015.1-201ENST00000622301 99 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
TNFRSF11AQ9Y6Q6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 SNORD61-201ENST00000384252 73 ntBASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR196B-201ENST00000384852 84 ntBASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR1261-201ENST00000408659 82 ntBASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AC091544.4-201ENST00000555268 342 ntBASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 MIR6733-201ENST00000635723 61 ntBASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.16□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TNFRSF11AQ9Y6Q6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TNFRSF11AQ9Y6Q6 SNORA25B-201ENST00000365507 128 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms