Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 HMGN2P19-201ENST00000425149 265 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 CALM2P4-201ENST00000430810 426 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 AC004792.1-201ENST00000614523 137 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 Pinc.1-201ENST00000616452 154 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 MIRLET7G-201ENST00000362280 84 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 Y_RNA.233-201ENST00000364407 101 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-851P-201ENST00000384565 107 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR660-201ENST00000385235 97 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 AL138827.1-201ENST00000402666 306 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU7-120P-201ENST00000459334 63 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 NDUFA4P2-201ENST00000489989 244 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 AC099513.1-201ENST00000490423 301 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORD77.4-201ENST00000516158 81 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU7-149P-201ENST00000516739 59 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR5004-201ENST00000579078 107 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 AC008507.4-201ENST00000585464 127 ntBASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
GTF3C3Q9Y5Q9 MIRLET7C-201ENST00000362160 84 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 Y_RNA.182-201ENST00000363880 111 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORD50B-201ENST00000364995 70 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-301P-201ENST00000384277 107 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR30A-201ENST00000385092 71 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 MT-TT-201ENST00000387460 66 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-578P-201ENST00000390980 103 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 SCARNA8-201ENST00000515924 131 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-453P-201ENST00000516819 85 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR4448-201ENST00000584360 86 ntBASIC3.23□□□□□ -1.89
GTF3C3Q9Y5Q9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-47P-201ENST00000383866 107 ntBASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 RPL23AP42-201ENST00000471152 471 ntBASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 AC090255.1-201ENST00000495779 349 ntBASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 AC114811.1-201ENST00000507207 168 ntBASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR514B-201ENST00000516774 80 ntBASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.22□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORA63.1-201ENST00000362493 131 ntBASIC3.21□□□□□ -1.9
GTF3C3Q9Y5Q9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.21□□□□□ -1.9
GTF3C3Q9Y5Q9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
GTF3C3Q9Y5Q9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.21□□□□□ -1.9
GTF3C3Q9Y5Q9 U6.105-201ENST00000637379 88 ntBASIC3.21□□□□□ -1.9
GTF3C3Q9Y5Q9 Y_RNA.75-201ENST00000362927 97 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 RNA5SP456-201ENST00000364002 114 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-312P-201ENST00000364629 107 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR194-1-201ENST00000384892 85 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 COTL1P1-201ENST00000422309 375 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 AC103810.8-201ENST00000607347 118 ntBASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-203P-201ENST00000384038 104 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU4-52P-201ENST00000384209 138 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 PIGPP3-201ENST00000425307 415 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 AL121914.1-201ENST00000450188 156 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-717P-201ENST00000459076 104 ntBASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
GTF3C3Q9Y5Q9 RNA5SP138-201ENST00000365098 114 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR670-201ENST00000390142 98 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU2-64P-201ENST00000411315 191 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 RNA5SP153-201ENST00000516498 76 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 AC109810.1-201ENST00000534066 224 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 MRPS18CP4-201ENST00000535821 231 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR3198-2-201ENST00000577868 80 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR4429-201ENST00000580105 73 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 AC108706.1-201ENST00000611053 297 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.18□□□□□ -1.9
GTF3C3Q9Y5Q9 SNORA71.3-201ENST00000362582 128 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-275P-201ENST00000364910 107 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-439P-201ENST00000384188 106 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR676-201ENST00000390702 67 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 snoU13.9-201ENST00000458927 103 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 AC107393.1-201ENST00000512403 346 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-365P-201ENST00000517113 106 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR1254-2-201ENST00000579553 63 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR7975-201ENST00000619350 68 ntBASIC3.17□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR452-201ENST00000385020 85 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU2-70P-201ENST00000410718 179 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 RNA5SP21-201ENST00000410917 96 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 SNRPGP8-201ENST00000454064 226 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 Y_RNA.662-201ENST00000516028 97 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 RNU6-1116P-201ENST00000517269 99 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 AL160236.1-201ENST00000556317 195 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 AC008739.3-201ENST00000603262 127 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 AC098479.1-201ENST00000609225 154 ntBASIC3.16□□□□□ -1.9
GTF3C3Q9Y5Q9 MIR7112-201ENST00000616126 65 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms