Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC245047.8-201ENST00000456455 284 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
FOXA2Q9Y261 SNORD45.4-201ENST00000516629 73 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 RNU7-110P-201ENST00000516891 62 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 MIR5188-201ENST00000583467 113 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AC011373.1-201ENST00000607270 237 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AC010205.1-201ENST00000616668 449 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AC008163.1-202ENST00000636004 2889 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.263-201ENST00000364659 114 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.462-201ENST00000384268 102 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MIR15B-201ENST00000385045 98 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MIR1285-1-201ENST00000408593 84 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 SNRPGP10-201ENST00000432323 225 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.95□□□□□ -2.26
FOXA2Q9Y261 HMGN2P32-201ENST00000444648 269 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MTND5P20-201ENST00000448677 143 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 RNU6-976P-201ENST00000516086 111 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 RNU7-116P-201ENST00000516940 62 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MIR548S-201ENST00000581352 82 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 AL121655.1-201ENST00000605811 308 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 AC104985.2-201ENST00000620598 500 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.95□□□□□ -2.26
FOXA2Q9Y261 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
FOXA2Q9Y261 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
FOXA2Q9Y261 SNORD114-24-201ENST00000365029 72 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.338-201ENST00000365320 114 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 RNU1-115P-201ENST00000365329 160 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.496-201ENST00000384444 101 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.526-201ENST00000384572 110 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 SNORA40.14-201ENST00000516543 86 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 RNU4-77P-201ENST00000516692 156 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.702-201ENST00000516843 96 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 AC093027.1-201ENST00000546698 429 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 MIR4498-201ENST00000577599 66 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 MIR4801-201ENST00000582704 82 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 AL050343.2-201ENST00000607338 280 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 AL606534.2-204ENST00000635008 178 ntBASIC0.94□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.252-201ENST00000364556 101 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.327-201ENST00000365201 102 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 SNORD14.1-201ENST00000365609 90 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 RNU6-1323P-201ENST00000384025 107 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.439-201ENST00000384119 94 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.456-201ENST00000384232 111 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.458-201ENST00000384240 102 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 RNU6-21P-201ENST00000384710 107 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 MIR200A-201ENST00000384875 90 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 MIR520C-201ENST00000385005 87 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 MTND1P14-201ENST00000427400 950 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXA2Q9Y261 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 RNU6-507P-201ENST00000516045 100 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.713-201ENST00000517013 96 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXA2Q9Y261 MIR4423-201ENST00000580922 80 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 MIR3192-201ENST00000584920 77 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 POLR3GP1-201ENST00000594073 261 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 DEFB117-201ENST00000602356 141 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 AL359821.1-201ENST00000605519 182 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 AL391903.3-201ENST00000612158 163 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 AC091925.1-201ENST00000623204 462 ntBASIC0.93□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.58-201ENST00000362807 102 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.154-201ENST00000363624 102 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 RNY3P1-201ENST00000365085 102 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 RNY3-201ENST00000365484 102 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 AC117470.1-201ENST00000381974 330 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 RNU7-21P-201ENST00000459430 62 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 SNORA18.7-201ENST00000516910 131 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 SNORA74.3-201ENST00000517108 154 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 AC090142.3-201ENST00000519012 385 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 PRELID3BP2-201ENST00000605362 201 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 JPX_2.1-201ENST00000614161 69 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 AC112487.2-201ENST00000637950 304 ntBASIC0.92□□□□□ -2.26
FOXA2Q9Y261 SNORD50B-201ENST00000364995 70 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 Y_RNA.368-201ENST00000365547 113 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 AL590004.1-201ENST00000405321 300 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.91□□□□□ -2.26
FOXA2Q9Y261 U8.20-201ENST00000459445 131 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.91□□□□□ -2.26
FOXA2Q9Y261 RPS26P48-201ENST00000491713 339 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 RPL23AP54-201ENST00000495129 419 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.91□□□□□ -2.26
FOXA2Q9Y261 AC006157.1-201ENST00000611750 366 ntBASIC0.91□□□□□ -2.26
FOXA2Q9Y261 MIR103A2-201ENST00000362154 78 ntBASIC0.9□□□□□ -2.27
FOXA2Q9Y261 RNA5SP264-201ENST00000363115 107 ntBASIC0.9□□□□□ -2.27
FOXA2Q9Y261 SNORD14E-201ENST00000364009 85 ntBASIC0.9□□□□□ -2.27
FOXA2Q9Y261 Y_RNA.310-201ENST00000365063 113 ntBASIC0.9□□□□□ -2.27
FOXA2Q9Y261 Y_RNA.330-201ENST00000365230 109 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms