Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 AC097462.1-201ENST00000514125 324 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 RNA5SP153-201ENST00000516498 76 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 Y_RNA.690-201ENST00000516603 95 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 RNU7-172P-201ENST00000517125 64 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 AC011604.1-201ENST00000545978 196 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 MIR4438-201ENST00000585271 93 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 Pinc.1-201ENST00000616452 154 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 AC006435.5-201ENST00000624486 112 ntBASIC2.37□□□□□ -2.03
PACSIN3Q9UKS6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 Y_RNA.35-201ENST00000362601 101 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 Y_RNA.43-201ENST00000362670 111 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 SNORD58C-201ENST00000365223 64 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 AC008134.1-201ENST00000420943 193 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 AC063976.4-201ENST00000421971 163 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 MTCO1P44-201ENST00000441935 243 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 RNA5SP170-201ENST00000517150 101 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 U6.95-201ENST00000636931 70 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.36□□□□□ -2.03
PACSIN3Q9UKS6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AC009487.4-201ENST00000624969 3585 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 RNU4-82P-201ENST00000362443 140 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 RNU6-1255P-201ENST00000363434 112 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 MIR562-201ENST00000384894 95 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AL603914.1-201ENST00000401964 204 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 Y_RNA.617-201ENST00000410920 90 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 RPS26P45-201ENST00000471748 340 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 RNU7-149P-201ENST00000516739 59 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 RNA5SP490-201ENST00000517141 136 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AC018630.3-201ENST00000542637 96 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AC105245.1-201ENST00000581934 244 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AC097639.2-201ENST00000603159 172 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 MIR7157-201ENST00000635801 60 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 MIR4679-1-201ENST00000637619 75 ntBASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PACSIN3Q9UKS6 AC080128.1-201ENST00000474389 1917 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 SNORD18B-201ENST00000365659 72 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 RNU2-32P-201ENST00000411193 191 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 SCARNA3-201ENST00000517097 143 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 AC007751.1-201ENST00000529260 376 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 MIR2681-201ENST00000581814 105 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 AL670379.3-201ENST00000605040 251 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.34□□□□□ -2.03
PACSIN3Q9UKS6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
PACSIN3Q9UKS6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 MIR340-201ENST00000362125 95 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 RNU1-23P-201ENST00000363361 144 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 RNU6-301P-201ENST00000384277 107 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 SNORD116-21-201ENST00000384507 92 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 MIR548A1-201ENST00000385041 97 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 MIR548A3-201ENST00000385297 97 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 RNA5SP89-201ENST00000410300 108 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 AC023449.1-201ENST00000454464 154 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 Y_RNA.651-201ENST00000459380 103 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 RNU6-991P-201ENST00000516168 107 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 MIR4446-201ENST00000578505 67 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 MIR3199-1-201ENST00000582434 88 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 U2.20-201ENST00000613956 192 ntBASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PACSIN3Q9UKS6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 Y_RNA.66-201ENST00000362862 102 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 SNORA1-201ENST00000384107 130 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 U6atac.2-201ENST00000408644 118 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 AC060773.1-201ENST00000421698 310 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 OR9P1P-201ENST00000496431 281 ntBASIC2.32□□□□□ -2.04
PACSIN3Q9UKS6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 241.3 ms