Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RPS3AP52-201ENST00000435639 297 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 MTND1P34-201ENST00000438556 671 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 RPS20P10-201ENST00000451209 253 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC107399.1-201ENST00000451226 265 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC233266.1-201ENST00000454518 96 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 RNU7-87P-201ENST00000459343 62 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 SNORA74.3-201ENST00000517108 154 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC009229.3-201ENST00000608056 282 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC242852.1-201ENST00000612151 96 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 SEPT14P17-201ENST00000617978 177 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC092794.2-201ENST00000620933 563 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 AC244015.1-201ENST00000622301 99 ntBASIC0.63□□□□□ -2.31
CTNNA3Q9UI47 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 RNU6-601P-201ENST00000384540 107 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 MIR1298-201ENST00000408783 112 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 RNA5SP511-201ENST00000410487 115 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 AC016907.1-201ENST00000419483 435 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 AC098869.1-201ENST00000481627 292 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CTNNA3Q9UI47 Y_RNA.6-201ENST00000362350 114 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 SNORD115-47-201ENST00000391226 86 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 MIR548F5-201ENST00000408421 86 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNU2-61P-201ENST00000411069 191 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 AC114811.1-201ENST00000507207 168 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNU6-1337P-201ENST00000516525 95 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNA5SP395-201ENST00000516567 118 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNU6-1116P-201ENST00000517269 99 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 MTND4LP26-201ENST00000518144 282 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RBM11P1-201ENST00000604951 799 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 AC243829.6-201ENST00000612652 106 ntBASIC0.61□□□□□ -2.31
CTNNA3Q9UI47 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 Y_RNA.577-201ENST00000384794 101 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 MIR136-201ENST00000385207 82 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 RNU2-54P-201ENST00000410299 190 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 MRPS18CP6-201ENST00000423587 223 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 MTND4P28-201ENST00000426217 387 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 AC011352.1-201ENST00000512300 793 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 AC004467.1-201ENST00000615678 330 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 AC240442.1-201ENST00000616055 283 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 AL591926.4-201ENST00000616895 298 ntBASIC0.6□□□□□ -2.31
CTNNA3Q9UI47 Y_RNA.86-201ENST00000363020 111 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 Y_RNA.88-201ENST00000363029 99 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 RNA5SP48-201ENST00000363969 126 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 Y_RNA.404-201ENST00000383978 102 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 Y_RNA.473-201ENST00000384333 102 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 MIR522-201ENST00000385071 87 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 AL353997.1-201ENST00000432936 108 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 MTND3P10-201ENST00000450967 341 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 RNU6-1110P-201ENST00000516462 101 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 RNU6-63P-201ENST00000516690 95 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 AC006380.1-201ENST00000603598 186 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 AC007014.2-201ENST00000615581 479 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 PISRT1.1-201ENST00000616930 107 ntBASIC0.59□□□□□ -2.31
CTNNA3Q9UI47 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 AC092423.1-201ENST00000430165 186 ntBASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 HMGN2P32-201ENST00000444648 269 ntBASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 RNU6-358P-201ENST00000516564 75 ntBASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 AC131055.1-201ENST00000584626 316 ntBASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
CTNNA3Q9UI47 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 SNORD68-201ENST00000363214 84 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.330-201ENST00000365230 109 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 RNY3P4-201ENST00000384428 101 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 RNU6-1215P-201ENST00000384441 102 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 SNORA75.4-201ENST00000391278 119 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 AL031003.1-201ENST00000404229 172 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 MIR1185-1-201ENST00000408598 86 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 PIGPP3-201ENST00000425307 415 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 RPL23AP50-201ENST00000434149 455 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 MIR2053-201ENST00000459295 91 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 RPL7P42-201ENST00000481005 679 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 RNU6-408P-201ENST00000515910 100 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 RN7SKP164-201ENST00000516138 266 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 AC060780.3-201ENST00000589464 80 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms