Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DNAJC28Q9NX36 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 RNU6-112P-201ENST00000363599 104 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 Y_RNA.572-201ENST00000384757 98 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 UBL5P3-201ENST00000475112 231 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 RNU2-56P-201ENST00000516826 190 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 AP002392.1-201ENST00000537692 208 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 MIR1273D-201ENST00000577266 86 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 MIR2681-201ENST00000581814 105 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.3□□□□□ -2.04
DNAJC28Q9NX36 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 Y_RNA.7-201ENST00000362352 102 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 snoU2_19.4-201ENST00000364329 80 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 RNU4-41P-201ENST00000364426 143 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 RNU6-296P-201ENST00000384608 107 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 RNA5SP100-201ENST00000410903 110 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 RNA5SP59-201ENST00000410922 110 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 RNU7-120P-201ENST00000459334 63 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 snoU13.15-201ENST00000459407 104 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 RN7SKP164-201ENST00000516138 266 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 AC098479.1-201ENST00000609225 154 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DNAJC28Q9NX36 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 Y_RNA.121-201ENST00000363309 113 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 Y_RNA.229-201ENST00000364347 113 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 Y_RNA.571-201ENST00000384753 98 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 MIR616-201ENST00000385293 97 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 RNA5SP496-201ENST00000391240 109 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 RN7SKP101-201ENST00000411376 320 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 AL049830.1-201ENST00000468034 425 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 AC072026.1-201ENST00000605023 201 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 MIR8054-201ENST00000620877 86 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 MIR7843-201ENST00000622274 79 ntBASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
DNAJC28Q9NX36 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
DNAJC28Q9NX36 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 RNU6-103P-201ENST00000363686 107 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 Y_RNA.796-201ENST00000364268 102 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 Y_RNA.233-201ENST00000364407 101 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 Y_RNA.253-201ENST00000364562 112 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 Y_RNA.799-201ENST00000364992 102 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 MIR504-201ENST00000385065 83 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 RNU6-440P-201ENST00000390882 105 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 AL512604.1-201ENST00000404812 257 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 MIR1278-201ENST00000408753 81 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 PIGPP3-201ENST00000425307 415 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 HMGN1P7-201ENST00000491722 313 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 AC107393.1-201ENST00000512403 346 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 RNA5SP437-201ENST00000517249 129 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 IGLV3-17-201ENST00000519099 244 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 AL021707.8-201ENST00000609428 183 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 AL391903.3-201ENST00000612158 163 ntBASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
DNAJC28Q9NX36 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 RNU6-1209P-201ENST00000363655 107 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 Y_RNA.238-201ENST00000364441 102 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 RNU6-950P-201ENST00000384651 107 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 MT-TR-201ENST00000387439 65 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 RNU2-7P-201ENST00000410794 178 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 SCARNA8-201ENST00000515924 131 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 SNORA31.10-201ENST00000516482 106 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 RNU7-28P-201ENST00000516759 62 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 AC022559.1-201ENST00000520905 205 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 RPL23AP91-201ENST00000569211 455 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 MIR5007-201ENST00000583098 95 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 JPX_2.1-201ENST00000614161 69 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 MIR203B-201ENST00000636080 86 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 ZNF702P-202ENST00000434269 1966 ntBASIC2.26□□□□□ -2.05
DNAJC28Q9NX36 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 AC008555.8-201ENST00000623602 2168 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 RNA5SP432-201ENST00000362480 116 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 RNU4-70P-201ENST00000384579 139 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 RNU2-2P-201ENST00000410396 191 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 RNA5SP481-201ENST00000516814 122 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 RNU6-453P-201ENST00000516819 85 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 RNU2-4P-201ENST00000606190 192 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 AL591926.4-201ENST00000616895 298 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 FTX_2.1-201ENST00000618816 94 ntBASIC2.25□□□□□ -2.05
DNAJC28Q9NX36 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms