Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 Y_RNA.789-201ENST00000622480 102 ntBASIC1.8□□□□□ -2.12
LIN7CQ9NUP9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 RNU6-144P-201ENST00000383951 107 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 MIR194-1-201ENST00000384892 85 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 MIR1278-201ENST00000408753 81 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 MLLT10P1-201ENST00000418346 262 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 CALM2P4-201ENST00000430810 426 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 SNORD2.1-201ENST00000458762 69 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 AC079804.2-201ENST00000490376 200 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 HMGN1P7-201ENST00000491722 313 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 RNA5SP168-201ENST00000516642 112 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 MIR514B-201ENST00000516774 80 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 BX284668.6-201ENST00000606899 438 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 AC073349.3-201ENST00000617616 186 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 AC064859.1-201ENST00000624741 174 ntBASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LIN7CQ9NUP9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 RNU6-674P-201ENST00000363831 107 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 U8.16-201ENST00000391279 133 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 RNA5SP425-201ENST00000410336 112 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 PGBD4P5-201ENST00000445958 426 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 AC005908.1-201ENST00000468701 347 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 AC008413.1-201ENST00000511864 177 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 MIR4282-201ENST00000583613 67 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 MIR6873-201ENST00000622788 63 ntBASIC1.78□□□□□ -2.12
LIN7CQ9NUP9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.65-201ENST00000362846 100 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 RNU4-10P-201ENST00000364383 140 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.401-201ENST00000383965 117 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 RNU6-424P-201ENST00000384367 105 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.539-201ENST00000384635 107 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 MIR221-201ENST00000385135 110 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 RNU6-383P-201ENST00000410864 94 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AL161935.2-201ENST00000414627 60 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 SNRPGP10-201ENST00000432323 225 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AL021397.1-201ENST00000451806 248 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 RPL23AP94-201ENST00000512518 302 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 RNU6-1023P-201ENST00000516137 106 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AC002984.1-201ENST00000591692 448 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 JPX_2.1-201ENST00000614161 69 ntBASIC1.77□□□□□ -2.13
LIN7CQ9NUP9 MIRLET7C-201ENST00000362160 84 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 MIR424-201ENST00000362227 98 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 SNORA20.1-201ENST00000364790 130 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.478-201ENST00000384358 107 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 MIR522-201ENST00000385071 87 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 RPL23AP91-201ENST00000569211 455 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 AL513423.1-201ENST00000621695 132 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 SNORD3E-202ENST00000627253 216 ntBASIC1.76□□□□□ -2.13
LIN7CQ9NUP9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 MIR367-201ENST00000362299 68 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.269-201ENST00000364685 89 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 RNU7-12P-201ENST00000516030 62 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 SNORD116-28-201ENST00000516123 91 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 MIR1273D-201ENST00000577266 86 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 MIR4724-201ENST00000579485 89 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 MIR2681-201ENST00000581814 105 ntBASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LIN7CQ9NUP9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.188-201ENST00000363952 111 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 MIR660-201ENST00000385235 97 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 RNU6-131P-201ENST00000391144 107 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 RNU6-1271P-201ENST00000517049 105 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 RNU6-111P-201ENST00000517179 105 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 SUMO2P16-201ENST00000519475 264 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 MIR4778-201ENST00000577635 80 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 MIR4762-201ENST00000585261 75 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 AC006006.1-201ENST00000603082 144 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms