Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.58-201ENST00000362807 102 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.154-201ENST00000363624 102 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 RNY3P1-201ENST00000365085 102 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 RNY3-201ENST00000365484 102 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-21P-201ENST00000384710 107 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 PIGPP3-201ENST00000425307 415 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 MIR4795-201ENST00000584182 89 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 AC104985.2-201ENST00000620598 500 ntBASIC1.3□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-131P-201ENST00000391144 107 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 RPS23P4-201ENST00000487908 423 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 LARP7P1-201ENST00000605576 316 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 AL133255.1-201ENST00000606374 441 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 AL050343.2-201ENST00000607338 280 ntBASIC1.29□□□□□ -2.2
BLOC1S4Q9NUP1 MIR522-201ENST00000385071 87 ntBASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 snoU13.31-201ENST00000607291 104 ntBASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 AC006157.1-201ENST00000611750 366 ntBASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
BLOC1S4Q9NUP1 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 AL391987.6-201ENST00000305671 199 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 SNORD14.1-201ENST00000365609 90 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 RNY1P14-201ENST00000384426 108 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 SNORA80D-201ENST00000384488 135 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 MIR526A1-201ENST00000384897 85 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 MIR1302-11-201ENST00000408051 138 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 MIR1302-9-201ENST00000408365 138 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 MIR1302-10-201ENST00000408734 138 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 AL117351.2-201ENST00000513571 157 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 RNU6-966P-201ENST00000516479 104 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 AL080274.1-201ENST00000605565 220 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 MIR1302-2-201ENST00000607096 138 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 SNORD58B-201ENST00000607313 66 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 AL008636.1-201ENST00000625038 1018 ntBASIC1.27□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 MIR19B1-201ENST00000384829 87 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 MIR1298-201ENST00000408783 112 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 MLLT10P1-201ENST00000418346 262 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 SNRPGP10-201ENST00000432323 225 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 AC040926.1-201ENST00000530195 238 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 AC087685.1-201ENST00000587507 141 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 POLR3GP1-201ENST00000594073 261 ntBASIC1.26□□□□□ -2.21
BLOC1S4Q9NUP1 SNORA63.7-201ENST00000365579 123 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 AC117470.1-201ENST00000381974 330 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 AC063976.4-201ENST00000421971 163 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 SEPT14P8-201ENST00000508026 178 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 SNORA25.10-201ENST00000515926 124 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 SNORD45.4-201ENST00000516629 73 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 DEFB117-201ENST00000602356 141 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 AP003357.1-201ENST00000604497 148 ntBASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.25□□□□□ -2.21
BLOC1S4Q9NUP1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.24□□□□□ -2.21
BLOC1S4Q9NUP1 MTND1P14-201ENST00000427400 950 ntBASIC1.24□□□□□ -2.21
BLOC1S4Q9NUP1 SNORD113-5-201ENST00000607261 78 ntBASIC1.24□□□□□ -2.21
BLOC1S4Q9NUP1 JPX_2.1-201ENST00000614161 69 ntBASIC1.24□□□□□ -2.21
BLOC1S4Q9NUP1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.24□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 HMGN1P10-201ENST00000474557 553 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 RNU6-1007P-201ENST00000516586 107 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 MIR2681-201ENST00000581814 105 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 HSPE1P19-201ENST00000603327 295 ntBASIC1.23□□□□□ -2.21
BLOC1S4Q9NUP1 SNORD81.1-201ENST00000363064 77 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 RNU6-937P-201ENST00000384325 106 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms