Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 PCNPP3-201ENST00000393579 471 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 RNU6-648P-201ENST00000410190 107 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.32□□□□□ -2.46
TREM1Q9NP99 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.32□□□□□ -2.46
TREM1Q9NP99 SNORA25.10-201ENST00000515926 124 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.32□□□□□ -2.46
TREM1Q9NP99 MTATP6P24-201ENST00000576835 677 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 MIR4273-201ENST00000582824 84 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 AC010525.2-201ENST00000590920 195 ntBASIC-0.32□□□□□ -2.46
TREM1Q9NP99 SNORD14E-201ENST00000364009 85 ntBASIC-0.33□□□□□ -2.46
TREM1Q9NP99 RNU6-929P-201ENST00000384429 107 ntBASIC-0.33□□□□□ -2.46
TREM1Q9NP99 MIR593-201ENST00000384856 100 ntBASIC-0.33□□□□□ -2.46
TREM1Q9NP99 MIR214-201ENST00000385214 110 ntBASIC-0.33□□□□□ -2.46
TREM1Q9NP99 RNU4-55P-201ENST00000410731 137 ntBASIC-0.33□□□□□ -2.46
TREM1Q9NP99 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.33□□□□□ -2.46
TREM1Q9NP99 RNU6-756P-201ENST00000383997 107 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 MIR570-201ENST00000384917 97 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 MIR643-201ENST00000385267 97 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.34□□□□□ -2.46
TREM1Q9NP99 SNRPGP10-201ENST00000432323 225 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 RPL17P19-201ENST00000489069 552 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 RNU6-835P-201ENST00000516974 104 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 AC005730.3-201ENST00000583067 366 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 Pinc.1-201ENST00000616452 154 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.34□□□□□ -2.46
TREM1Q9NP99 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.34□□□□□ -2.46
TREM1Q9NP99 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNA5SP325-201ENST00000363756 130 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 SNORA63C-201ENST00000364578 129 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNA5SP117-201ENST00000365294 118 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-747P-201ENST00000390928 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-241P-201ENST00000391148 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-447P-201ENST00000410293 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-355P-201ENST00000410427 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-791P-201ENST00000410467 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-705P-201ENST00000410601 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-860P-201ENST00000410860 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNA5SP127-201ENST00000411051 133 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RN7SKP142-201ENST00000411236 328 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNU6-785P-201ENST00000411324 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 AL445567.1-201ENST00000439121 144 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 SCARNA8-201ENST00000515924 131 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 RNA5SP330-201ENST00000517096 96 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 ZNF519P2-201ENST00000557032 169 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.35□□□□□ -2.47
TREM1Q9NP99 MIR4743-201ENST00000584576 69 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 U6.90-201ENST00000614007 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 U6.70-201ENST00000620287 104 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 AC098679.4-201ENST00000624241 654 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 MTND1P7-201ENST00000632801 297 ntBASIC-0.35□□□□□ -2.47
TREM1Q9NP99 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 SNORA72.1-201ENST00000363485 129 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 RNU6-364P-201ENST00000384387 107 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 RNU6-125P-201ENST00000384505 107 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 RNU6-127P-201ENST00000390897 107 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 U8.17-201ENST00000391292 132 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.36□□□□□ -2.47
TREM1Q9NP99 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.36□□□□□ -2.47
TREM1Q9NP99 HMGN1P10-201ENST00000474557 553 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 AC087752.4-201ENST00000605911 462 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 MIR4791-201ENST00000607666 84 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 MIR6755-201ENST00000619993 66 ntBASIC-0.36□□□□□ -2.47
TREM1Q9NP99 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 SNORD115-30-201ENST00000364117 82 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 SNORA1.2-201ENST00000365189 134 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
TREM1Q9NP99 MIR548H2-201ENST00000408874 88 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 PDCL2P1-201ENST00000419302 352 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 RNU7-62P-201ENST00000458856 62 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 RNU7-102P-201ENST00000458948 62 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.37□□□□□ -2.47
TREM1Q9NP99 AC087685.1-201ENST00000587507 141 ntBASIC-0.37□□□□□ -2.47
TREM1Q9NP99 BTF3P11-201ENST00000426582 477 ntBASIC-0.38□□□□□ -2.47
TREM1Q9NP99 MIR18B-201ENST00000454574 71 ntBASIC-0.38□□□□□ -2.47
TREM1Q9NP99 SNORA18.4-201ENST00000516440 124 ntBASIC-0.38□□□□□ -2.47
TREM1Q9NP99 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.38□□□□□ -2.47
TREM1Q9NP99 LRRC34P1-201ENST00000542742 915 ntBASIC-0.38□□□□□ -2.47
TREM1Q9NP99 RNU6-442P-201ENST00000383968 104 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 SNORA72-201ENST00000384339 132 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.39□□□□□ -2.47
TREM1Q9NP99 RNU6-848P-201ENST00000515948 107 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 RN7SKP298-201ENST00000515950 94 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 RNU6-617P-201ENST00000516147 107 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 RNU6-473P-201ENST00000516164 107 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 AC008608.1-201ENST00000603910 127 ntBASIC-0.39□□□□□ -2.47
TREM1Q9NP99 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms