Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 Y_RNA.80-201ENST00000362996 102 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 SNORA25.3-201ENST00000363205 127 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 SNORA72.1-201ENST00000363485 129 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 U8.5-201ENST00000364528 136 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 RNU6-1175P-201ENST00000365200 107 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.485-201ENST00000384395 102 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 MIR522-201ENST00000385071 87 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 SNRPGP10-201ENST00000432323 225 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 RPS20P10-201ENST00000451209 253 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 AC093027.1-201ENST00000546698 429 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 MIR4762-201ENST00000585261 75 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 AL357312.1-201ENST00000603879 298 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 AL391903.3-201ENST00000612158 163 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 AC027279.3-201ENST00000625055 122 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.69□□□□□ -2.3
HMG20AQ9NP66 MIR4272-201ENST00000635924 64 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
HMG20AQ9NP66 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.27-201ENST00000362540 103 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.58-201ENST00000362807 102 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 SNORD81.1-201ENST00000363064 77 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.154-201ENST00000363624 102 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNY3P1-201ENST00000365085 102 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNY3-201ENST00000365484 102 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU6-1105P-201ENST00000384774 107 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 AL590004.1-201ENST00000405321 300 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU6-321P-201ENST00000410912 106 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 MTND1P14-201ENST00000427400 950 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 AL603825.1-201ENST00000438481 80 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 AC010655.3-201ENST00000478818 450 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU7-41P-201ENST00000515917 61 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU6-507P-201ENST00000516045 100 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 RNU6-113P-201ENST00000516653 101 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 AC005972.2-201ENST00000604690 348 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 AC211469.2-201ENST00000605461 205 ntBASIC0.68□□□□□ -2.3
HMG20AQ9NP66 SNORD114-27-201ENST00000363766 70 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 SNORD50B-201ENST00000364995 70 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.384-201ENST00000383909 102 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.529-201ENST00000384586 119 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.570-201ENST00000384750 101 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 RNU6-855P-201ENST00000410395 104 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 MCFD2P1-201ENST00000417812 300 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.67□□□□□ -2.3
HMG20AQ9NP66 MTCO2P27-201ENST00000420740 428 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AC099799.1-201ENST00000439809 192 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AC245047.8-201ENST00000456455 284 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.661-201ENST00000516003 99 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 SNORD45.4-201ENST00000516629 73 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 SNORA18.7-201ENST00000516910 131 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 MIR3145-201ENST00000580727 82 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 VN1R91P-201ENST00000594377 169 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 DEFB117-201ENST00000602356 141 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 AC133104.2-201ENST00000615272 193 ntBASIC0.67□□□□□ -2.3
HMG20AQ9NP66 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
HMG20AQ9NP66 RNU6-1115P-201ENST00000362490 106 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.428-201ENST00000384078 102 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 MIR452-201ENST00000385020 85 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 SNORD12-201ENST00000391002 90 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.66□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.638-201ENST00000459374 113 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 RNU6-875P-201ENST00000516488 106 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 RNU4-77P-201ENST00000516692 156 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 SNORD116.3-201ENST00000517176 78 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 RN7SKP295-201ENST00000517264 153 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 MIR4423-201ENST00000580922 80 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 AC092447.9-201ENST00000603395 144 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 AC122108.2-201ENST00000611946 526 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 AC091925.1-201ENST00000623204 462 ntBASIC0.66□□□□□ -2.3
HMG20AQ9NP66 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.5-201ENST00000362334 102 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 RNU6-1084P-201ENST00000362498 107 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.230-201ENST00000364348 109 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.813-201ENST00000364639 102 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.310-201ENST00000365063 113 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.330-201ENST00000365230 109 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 Y_RNA.458-201ENST00000384240 102 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 SNORA72-201ENST00000384339 132 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 RNU4-30P-201ENST00000410245 143 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 AF228730.4-201ENST00000421457 183 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.65□□□□□ -2.31
HMG20AQ9NP66 SNORD19B-201ENST00000459623 84 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
HMG20AQ9NP66 RNU6-911P-201ENST00000516523 104 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms