Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 RNU6-324P-201ENST00000363957 106 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.15□□□□□ -2.23
RNF41Q9H4P4 RPS20P10-201ENST00000451209 253 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AC233266.1-201ENST00000454518 96 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 RNU6-165P-201ENST00000517170 99 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.15□□□□□ -2.23
RNF41Q9H4P4 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AC136932.1-201ENST00000574771 208 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 MIR4778-201ENST00000577635 80 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AC242852.1-201ENST00000612151 96 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 AC244015.1-201ENST00000622301 99 ntBASIC1.15□□□□□ -2.23
RNF41Q9H4P4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.15□□□□□ -2.23
RNF41Q9H4P4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 AL390729.2-201ENST00000416137 156 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 AC093850.1-201ENST00000454121 251 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 RPL30P7-201ENST00000479312 323 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 RNU6-917P-201ENST00000516294 104 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 DEFB117-201ENST00000602356 141 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 AC011373.1-201ENST00000607270 237 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 MIR8070-201ENST00000616510 88 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 AC106754.2-201ENST00000623006 233 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 AC090574.1-201ENST00000623186 233 ntBASIC1.14□□□□□ -2.23
RNF41Q9H4P4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RNF41Q9H4P4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
RNF41Q9H4P4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
RNF41Q9H4P4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
RNF41Q9H4P4 RNU4-50P-201ENST00000364361 141 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.445-201ENST00000384168 102 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.460-201ENST00000384255 102 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RNF41Q9H4P4 RNU6-823P-201ENST00000391042 103 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 RNU4-30P-201ENST00000410245 143 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.13□□□□□ -2.23
RNF41Q9H4P4 HMGN1P10-201ENST00000474557 553 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 AC011604.1-201ENST00000545978 196 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 AC019288.1-201ENST00000557918 224 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 MIR4762-201ENST00000585261 75 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 AL513534.2-201ENST00000603836 250 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 AC005972.2-201ENST00000604690 348 ntBASIC1.13□□□□□ -2.23
RNF41Q9H4P4 RNU6-199P-201ENST00000362954 107 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.128-201ENST00000363391 112 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 RNU4-76P-201ENST00000364509 141 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 SNORD41-201ENST00000386967 70 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 MIR1276-201ENST00000408707 83 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 AL591926.4-201ENST00000616895 298 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 AC134503.1-201ENST00000633048 54 ntBASIC1.12□□□□□ -2.23
RNF41Q9H4P4 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.222-201ENST00000364264 102 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 U8.5-201ENST00000364528 136 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 SNORA22B-201ENST00000383876 138 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 AL590004.1-201ENST00000405321 300 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 RNU7-12P-201ENST00000516030 62 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 RNU7-110P-201ENST00000516891 62 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 AC022616.4-201ENST00000522985 181 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 AC090049.2-201ENST00000550377 109 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 AC020661.2-201ENST00000560114 134 ntBASIC1.11□□□□□ -2.23
RNF41Q9H4P4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.11□□□□□ -2.23
RNF41Q9H4P4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RNF41Q9H4P4 RNU6-797P-201ENST00000363101 109 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 RNU6-833P-201ENST00000363486 107 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.424-201ENST00000384063 103 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.456-201ENST00000384232 111 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 SNORA72-201ENST00000384339 132 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 SNORD115-46-201ENST00000390982 71 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 RNU6-710P-201ENST00000410424 105 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 RNU6-113P-201ENST00000516653 101 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 MIR3145-201ENST00000580727 82 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.1□□□□□ -2.23
RNF41Q9H4P4 AC124312.5-201ENST00000604451 268 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 RAC1P9-201ENST00000604990 392 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 AC027279.3-201ENST00000625055 122 ntBASIC1.1□□□□□ -2.23
RNF41Q9H4P4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
RNF41Q9H4P4 MIR96-201ENST00000362288 78 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms