Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.05□□□□□ -2.24
NXF3Q9H4D5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.05□□□□□ -2.24
NXF3Q9H4D5 RNU7-28P-201ENST00000516759 62 ntBASIC1.05□□□□□ -2.24
NXF3Q9H4D5 AL358944.1-201ENST00000528537 144 ntBASIC1.05□□□□□ -2.24
NXF3Q9H4D5 AP002004.2-201ENST00000531656 154 ntBASIC1.05□□□□□ -2.24
NXF3Q9H4D5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.05□□□□□ -2.24
NXF3Q9H4D5 AL513423.1-201ENST00000621695 132 ntBASIC1.05□□□□□ -2.24
NXF3Q9H4D5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.28-201ENST00000362554 111 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.122-201ENST00000363331 96 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.128-201ENST00000363391 112 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.172-201ENST00000363765 102 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 RNU6-324P-201ENST00000363957 106 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.645-201ENST00000391229 102 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AL162725.1-201ENST00000435405 301 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 RPEP5-201ENST00000441137 268 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.04□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.631-201ENST00000459607 101 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AC019176.1-201ENST00000518519 225 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AL021879.1-201ENST00000611756 288 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AC040896.1-201ENST00000613819 479 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AC073349.3-201ENST00000617616 186 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 AC134503.1-201ENST00000633048 54 ntBASIC1.04□□□□□ -2.24
NXF3Q9H4D5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NXF3Q9H4D5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NXF3Q9H4D5 SNORA1B-201ENST00000362535 133 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.138-201ENST00000363462 102 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.148-201ENST00000363557 117 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.424-201ENST00000384063 103 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.471-201ENST00000384312 102 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 RNA5SP511-201ENST00000410487 115 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 AL354751.2-201ENST00000415471 210 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 STAG3L5P-204ENST00000443759 179 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 AC010655.3-201ENST00000478818 450 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 OR9P1P-201ENST00000496431 281 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 RNU6-1291P-201ENST00000516591 104 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 RNU2-56P-201ENST00000516826 190 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 AC022616.4-201ENST00000522985 181 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.03□□□□□ -2.24
NXF3Q9H4D5 MIR8065-201ENST00000620577 100 ntBASIC1.03□□□□□ -2.24
NXF3Q9H4D5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.216-201ENST00000364205 93 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.329-201ENST00000365209 107 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 SNORA63.7-201ENST00000365579 123 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.551-201ENST00000384661 102 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 RNA5SP482-201ENST00000391269 118 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 RNU6-710P-201ENST00000410424 105 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.02□□□□□ -2.25
NXF3Q9H4D5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.02□□□□□ -2.25
NXF3Q9H4D5 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 RNU6-1096P-201ENST00000517089 102 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 RNU6-988P-201ENST00000519081 107 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 AC011604.1-201ENST00000545978 196 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.02□□□□□ -2.25
NXF3Q9H4D5 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 AL078603.1-201ENST00000603824 313 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 AC011373.1-201ENST00000607270 237 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 PART1_1.1-201ENST00000611761 217 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
NXF3Q9H4D5 SNORD81.1-201ENST00000363064 77 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.143-201ENST00000363520 106 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNU6-450P-201ENST00000364654 107 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.265-201ENST00000364677 108 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNA5SP259-201ENST00000365541 109 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNU6-937P-201ENST00000384325 106 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNU6-424P-201ENST00000384367 105 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 SNORD116-13-201ENST00000384408 92 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 MIR660-201ENST00000385235 97 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNU6-823P-201ENST00000391042 103 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNU6-130P-201ENST00000411112 103 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RPS4XP11-201ENST00000446897 772 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 SUMO2P16-201ENST00000519475 264 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.01□□□□□ -2.25
NXF3Q9H4D5 AC104695.3-201ENST00000604052 296 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 AC004832.4-201ENST00000608952 331 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 MIR7111-201ENST00000619751 72 ntBASIC1.01□□□□□ -2.25
NXF3Q9H4D5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.01□□□□□ -2.25
NXF3Q9H4D5 RNA5SP327-201ENST00000362494 101 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 MIR548P-201ENST00000408336 84 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 MIR548J-201ENST00000408833 112 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
NXF3Q9H4D5 AC233266.1-201ENST00000454518 96 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 AL049830.1-201ENST00000468034 425 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 RNA5SP168-201ENST00000516642 112 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 RNU7-110P-201ENST00000516891 62 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.711-201ENST00000516993 102 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.715-201ENST00000517082 110 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 Y_RNA.721-201ENST00000517207 102 ntBASIC1□□□□□ -2.25
NXF3Q9H4D5 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms