Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RNU7-12P-201ENST00000516030 62 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 RNU7-110P-201ENST00000516891 62 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AC011604.1-201ENST00000545978 196 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AC136932.1-201ENST00000574771 208 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 DEFB117-201ENST00000602356 141 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AL513534.2-201ENST00000603836 250 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AC104695.3-201ENST00000604052 296 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 AC005972.2-201ENST00000604690 348 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.28□□□□□ -2.2
SNX25Q9H3E2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.28-201ENST00000362554 111 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 RNU4-30P-201ENST00000410245 143 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 DYNLT3P2-201ENST00000442517 295 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 RNU6-922P-201ENST00000516753 99 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 AL591926.4-201ENST00000616895 298 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 AC090574.1-201ENST00000623186 233 ntBASIC1.27□□□□□ -2.21
SNX25Q9H3E2 MIR337-201ENST00000362281 93 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.138-201ENST00000363462 102 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.368-201ENST00000365547 113 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.460-201ENST00000384255 102 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 SNORD41-201ENST00000386967 70 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 RNU6-855P-201ENST00000410395 104 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX25Q9H3E2 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.713-201ENST00000517013 96 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 AC090049.2-201ENST00000550377 109 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX25Q9H3E2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX25Q9H3E2 MIR4762-201ENST00000585261 75 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
SNX25Q9H3E2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX25Q9H3E2 SNORD68-201ENST00000363214 84 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 U8.5-201ENST00000364528 136 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.286-201ENST00000364813 102 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.424-201ENST00000384063 103 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 RNU6-823P-201ENST00000391042 103 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 AL590004.1-201ENST00000405321 300 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 RNU6-710P-201ENST00000410424 105 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.631-201ENST00000459607 101 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 HMGN1P10-201ENST00000474557 553 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 RNU6-1046P-201ENST00000516538 107 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 MIR3145-201ENST00000580727 82 ntBASIC1.25□□□□□ -2.21
SNX25Q9H3E2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SNX25Q9H3E2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SNX25Q9H3E2 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.128-201ENST00000363391 112 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 RNU6-833P-201ENST00000363486 107 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.341-201ENST00000365341 102 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 SNORA2.2-201ENST00000365473 135 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 RNU6-1323P-201ENST00000384025 107 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.456-201ENST00000384232 111 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 AC022616.4-201ENST00000522985 181 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 AC124312.5-201ENST00000604451 268 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX25Q9H3E2 AC027279.3-201ENST00000625055 122 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 AC134503.1-201ENST00000633048 54 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 AC068647.2-201ENST00000637380 353 ntBASIC1.24□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 SNORA72-201ENST00000384339 132 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 RNU6-21P-201ENST00000384710 107 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 MIR526A1-201ENST00000384897 85 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 PIGPP3-201ENST00000425307 415 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 AC104332.1-201ENST00000440471 797 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 RNU6-397P-201ENST00000516226 104 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.715-201ENST00000517082 110 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 AC120024.3-201ENST00000603167 156 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.23□□□□□ -2.21
SNX25Q9H3E2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.23□□□□□ -2.21
SNX25Q9H3E2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.222-201ENST00000364264 102 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 RNU6-450P-201ENST00000364654 107 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 SNORA22B-201ENST00000383876 138 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 RNU6-163P-201ENST00000384396 106 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 RNU6-1105P-201ENST00000384774 107 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 MIR522-201ENST00000385071 87 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 HMGN1P7-201ENST00000491722 313 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 CYCTP-201ENST00000504253 315 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 AC114811.1-201ENST00000507207 168 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 SEPT14P8-201ENST00000508026 178 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 Y_RNA.711-201ENST00000516993 102 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 RAC1P9-201ENST00000604990 392 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
SNX25Q9H3E2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
SNX25Q9H3E2 SNORA63.7-201ENST00000365579 123 ntBASIC1.21□□□□□ -2.22
SNX25Q9H3E2 Y_RNA.383-201ENST00000383855 97 ntBASIC1.21□□□□□ -2.22
SNX25Q9H3E2 MIR891A-201ENST00000401237 79 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms