Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AC124312.5-201ENST00000604451 268 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AL591926.4-201ENST00000616895 298 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AL160413.1-201ENST00000622780 310 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.21□□□□□ -2.22
UBQLN3Q9H347 AL391987.6-201ENST00000305671 199 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 MIRLET7C-201ENST00000362160 84 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 SNORD81.1-201ENST00000363064 77 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.341-201ENST00000365341 102 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 RNU6-322P-201ENST00000516010 103 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 RNU6-917P-201ENST00000516294 104 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 MIR3145-201ENST00000580727 82 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 PART1_1.1-201ENST00000611761 217 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.21□□□□□ -2.22
UBQLN3Q9H347 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
UBQLN3Q9H347 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
UBQLN3Q9H347 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.61-201ENST00000362835 102 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 SNORD63-201ENST00000384262 68 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 MIR891A-201ENST00000401237 79 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 AL451046.2-201ENST00000403074 277 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 AL590004.1-201ENST00000405321 300 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 RNU6-130P-201ENST00000411112 103 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 PMCHL1-202ENST00000423102 261 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 AC005840.1-201ENST00000498412 377 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 RNU6-397P-201ENST00000516226 104 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 AC022616.4-201ENST00000522985 181 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 AC090049.2-201ENST00000550377 109 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 AC120024.3-201ENST00000603167 156 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 MTND4P29-201ENST00000503122 1372 ntBASIC1.2□□□□□ -2.22
UBQLN3Q9H347 RNU6-450P-201ENST00000364654 107 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 SNORA2.2-201ENST00000365473 135 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 RNU6-474P-201ENST00000384243 107 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 CYCTP-201ENST00000504253 315 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 AC114811.1-201ENST00000507207 168 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 RNU6-1046P-201ENST00000516538 107 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 GHRLOS.1-201ENST00000610995 70 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.19□□□□□ -2.22
UBQLN3Q9H347 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.4-201ENST00000362333 112 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.28-201ENST00000362554 111 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.148-201ENST00000363557 117 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.389-201ENST00000383924 113 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.394-201ENST00000383942 103 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 SNORA72-201ENST00000384339 132 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.535-201ENST00000384612 99 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 MIR653-201ENST00000385279 96 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
UBQLN3Q9H347 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.631-201ENST00000459607 101 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 SEPT14P8-201ENST00000508026 178 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 TRMT112P2-201ENST00000512910 132 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 RNU6-988P-201ENST00000519081 107 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 FAM106DP-201ENST00000586416 501 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
UBQLN3Q9H347 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.18□□□□□ -2.22
UBQLN3Q9H347 RNU6-1084P-201ENST00000362498 107 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 RNY1P10-201ENST00000363268 113 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 RNU6-833P-201ENST00000363486 107 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.253-201ENST00000364562 112 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.286-201ENST00000364813 102 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.383-201ENST00000383855 97 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.456-201ENST00000384232 111 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 SNORD41-201ENST00000386967 70 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 RNU6-101P-201ENST00000410323 104 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 POLR2KP2-201ENST00000438155 177 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 AC010655.3-201ENST00000478818 450 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.17□□□□□ -2.22
UBQLN3Q9H347 AC136932.1-201ENST00000574771 208 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 POLR3GP1-201ENST00000594073 261 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 SNORD113-5-201ENST00000607261 78 ntBASIC1.17□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.128-201ENST00000363391 112 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.310-201ENST00000365063 113 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.645-201ENST00000391229 102 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.602-201ENST00000410535 92 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 MTCO2P12-201ENST00000427426 682 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.16□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.676-201ENST00000516393 96 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 Y_RNA.715-201ENST00000517082 110 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 AC104695.3-201ENST00000604052 296 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 MIR376A1-201ENST00000616574 68 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 AC027279.3-201ENST00000625055 122 ntBASIC1.16□□□□□ -2.22
UBQLN3Q9H347 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
UBQLN3Q9H347 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
UBQLN3Q9H347 RNU6-797P-201ENST00000363101 109 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 RNU4-80P-201ENST00000363200 141 ntBASIC1.15□□□□□ -2.23
UBQLN3Q9H347 SNORD113-8-201ENST00000363497 74 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms