Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RNU6-21P-201ENST00000384710 107 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 MIR522-201ENST00000385071 87 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 SNORA40.6-201ENST00000391153 128 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 SNORA17.3-201ENST00000391159 129 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 HMGN1P7-201ENST00000491722 313 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 SNORD111.1-201ENST00000516421 86 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.24□□□□□ -2.21
CCDC68Q9H2F9 Y_RNA.143-201ENST00000363520 106 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 RNU4-50P-201ENST00000364361 141 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 Y_RNA.471-201ENST00000384312 102 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 RNU6-937P-201ENST00000384325 106 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 RNU6-131P-201ENST00000391144 107 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 RNU4-30P-201ENST00000410245 143 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 AL603825.1-201ENST00000438481 80 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 AC108729.3-201ENST00000513484 108 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 AL117351.2-201ENST00000513571 157 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 RNU6-1170P-201ENST00000515974 106 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 SNORD116-28-201ENST00000516123 91 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 SNORD45.4-201ENST00000516629 73 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 RNU7-116P-201ENST00000516940 62 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 AC040926.1-201ENST00000530195 238 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 POLR3GP1-201ENST00000594073 261 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 AL080274.1-201ENST00000605565 220 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 AL133255.1-201ENST00000606374 441 ntBASIC1.23□□□□□ -2.21
CCDC68Q9H2F9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 SNORD81.1-201ENST00000363064 77 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 SNORD14.1-201ENST00000365609 90 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 Y_RNA.456-201ENST00000384232 111 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 Y_RNA.551-201ENST00000384661 102 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 MIR516B2-201ENST00000385190 85 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 AL590004.1-201ENST00000405321 300 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 SNRPGP10-201ENST00000432323 225 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 AL050343.2-201ENST00000607338 280 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CCDC68Q9H2F9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.368-201ENST00000365547 113 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 SNORD63-201ENST00000384262 68 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 AC022028.1-201ENST00000412054 408 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 BTF3P4-201ENST00000418852 495 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 AC093852.1-201ENST00000503587 266 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 SNORD79.1-201ENST00000516069 84 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 MIR3145-201ENST00000580727 82 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 snoU13.31-201ENST00000607291 104 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 AC007485.1-201ENST00000616755 206 ntBASIC1.21□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.424-201ENST00000384063 103 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 SNORA80D-201ENST00000384488 135 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 MIR136-201ENST00000385207 82 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 AC063976.4-201ENST00000421971 163 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 HSPE1P19-201ENST00000603327 295 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC68Q9H2F9 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 AC092473.1-201ENST00000441098 221 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 HMGN2P32-201ENST00000444648 269 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 RNU6-475P-201ENST00000516073 104 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 AC024405.2-202ENST00000532731 184 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 MIR4498-201ENST00000577599 66 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 LARP7P1-201ENST00000605576 316 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 uc_338.22-201ENST00000622722 187 ntBASIC1.19□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.112-201ENST00000363250 102 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 SNORD50B-201ENST00000364995 70 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 Y_RNA.431-201ENST00000384086 102 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 MIR1302-11-201ENST00000408051 138 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 MIR1302-9-201ENST00000408365 138 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 MIR1302-10-201ENST00000408734 138 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 MTATP6P23-201ENST00000440153 476 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 AC117454.1-201ENST00000491120 168 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 RPL23AP54-201ENST00000495129 419 ntBASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.18□□□□□ -2.22
CCDC68Q9H2F9 AP001094.1-201ENST00000579805 193 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms