Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 snoU2-30.1-201ENST00000365012 70 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 MIR573-201ENST00000384964 99 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.18□□□□□ -2.38
ALX4Q9H161 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.18□□□□□ -2.38
ALX4Q9H161 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.18□□□□□ -2.38
ALX4Q9H161 SNORD5.1-201ENST00000458800 75 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 AC010486.3-201ENST00000511602 785 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 MIR2115-201ENST00000516657 100 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 Y_RNA.68-201ENST00000362881 102 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 Y_RNA.168-201ENST00000363740 102 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 RNU4-45P-201ENST00000365469 141 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 Y_RNA.370-201ENST00000365589 108 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 MLLT10P1-201ENST00000418346 262 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 MTND1P26-201ENST00000440488 538 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 U8.19-201ENST00000459095 133 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 U8.22-201ENST00000459141 133 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 AC245008.1-201ENST00000608123 476 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 MIR6128-201ENST00000615528 109 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 AC015726.2-201ENST00000620112 122 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 AP000770.2-201ENST00000623694 100 ntBASIC0.17□□□□□ -2.38
ALX4Q9H161 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 SNORD115-30-201ENST00000364117 82 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 RNU6-1013P-201ENST00000384180 107 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 RNU6-373P-201ENST00000411247 98 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 MTND1P17-201ENST00000448961 204 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 RNU6-273P-201ENST00000516937 96 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 Y_RNA.714-201ENST00000517065 90 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 AC105029.1-201ENST00000520250 669 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
ALX4Q9H161 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.16□□□□□ -2.38
ALX4Q9H161 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNU6-396P-201ENST00000365369 105 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNU6-318P-201ENST00000384283 103 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNU6-131P-201ENST00000391144 107 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNA5SP95-201ENST00000410319 137 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 HMGN1P33-201ENST00000432945 451 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.15□□□□□ -2.39
ALX4Q9H161 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.15□□□□□ -2.39
ALX4Q9H161 SNORA25.10-201ENST00000515926 124 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNU6-566P-201ENST00000516790 107 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNU6-1088P-201ENST00000516850 104 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 RNU2-12P-201ENST00000517216 168 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.15□□□□□ -2.39
ALX4Q9H161 AL355375.2-201ENST00000574825 175 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 AC005014.2-201ENST00000607795 599 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 MIR3662-201ENST00000637030 95 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 AC024614.3-201ENST00000637860 256 ntBASIC0.15□□□□□ -2.39
ALX4Q9H161 MIR18A-201ENST00000362310 71 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 RNU6-874P-201ENST00000362390 105 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 Y_RNA.280-201ENST00000364765 112 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 SNORD50B-201ENST00000364995 70 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 SNORD116-9-201ENST00000384000 95 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 SNORD116-3-201ENST00000384287 95 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 SNORD116-7-201ENST00000384404 95 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 SNORD116-5-201ENST00000384462 95 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.14□□□□□ -2.39
ALX4Q9H161 MTND1P1-201ENST00000445453 368 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 RNU6-329P-201ENST00000459618 107 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 HMGN1P10-201ENST00000474557 553 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.14□□□□□ -2.39
ALX4Q9H161 AC116353.2-201ENST00000505332 712 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 AP003327.1-201ENST00000529684 127 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 MIR548AR-201ENST00000582191 57 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 AC012433.1-201ENST00000588916 398 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 AC090617.10-201ENST00000624308 134 ntBASIC0.14□□□□□ -2.39
ALX4Q9H161 RNU6-369P-201ENST00000362515 102 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 Y_RNA.358-201ENST00000365491 99 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 Y_RNA.368-201ENST00000365547 113 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 Y_RNA.376-201ENST00000365638 108 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 SNORD12B-201ENST00000410433 91 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 AC009161.1-201ENST00000417306 376 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.13□□□□□ -2.39
ALX4Q9H161 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.13□□□□□ -2.39
ALX4Q9H161 MTCO3P10-201ENST00000455912 772 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 RNU6-1314P-201ENST00000517139 104 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 AC006380.1-201ENST00000603598 186 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 AL162730.1-201ENST00000605734 292 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 AC004467.1-201ENST00000615678 330 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 AC092634.7-201ENST00000621022 103 ntBASIC0.13□□□□□ -2.39
ALX4Q9H161 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.12□□□□□ -2.39
ALX4Q9H161 Y_RNA.148-201ENST00000363557 117 ntBASIC0.12□□□□□ -2.39
ALX4Q9H161 RNU6-831P-201ENST00000384548 107 ntBASIC0.12□□□□□ -2.39
ALX4Q9H161 MIR520H-201ENST00000385126 88 ntBASIC0.12□□□□□ -2.39
ALX4Q9H161 AL031003.1-201ENST00000404229 172 ntBASIC0.12□□□□□ -2.39
ALX4Q9H161 AL139396.1-201ENST00000421137 167 ntBASIC0.12□□□□□ -2.39
ALX4Q9H161 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.12□□□□□ -2.39
ALX4Q9H161 MIR103A1-201ENST00000362165 78 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 SNORD14E-201ENST00000364009 85 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 RNU6-580P-201ENST00000365159 107 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 Y_RNA.412-201ENST00000384001 104 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 SNORA72-201ENST00000384339 132 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 Y_RNA.476-201ENST00000384347 108 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 SNORD38C-201ENST00000384381 69 ntBASIC0.11□□□□□ -2.39
ALX4Q9H161 MIR520F-201ENST00000384824 87 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms