Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MIR18A-201ENST00000362310 71 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.38-201ENST00000362617 102 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.148-201ENST00000363557 117 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 RNU4-67P-201ENST00000364569 141 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 SNORD50B-201ENST00000364995 70 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.376-201ENST00000365638 108 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 RNU6-1013P-201ENST00000384180 107 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 MIR520F-201ENST00000384824 87 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 MIR520H-201ENST00000385126 88 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK3BQ9BT76 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK3BQ9BT76 SNORD5.1-201ENST00000458800 75 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK3BQ9BT76 SNORA25.10-201ENST00000515926 124 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 RNU6-977P-201ENST00000516411 103 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 AP003327.1-201ENST00000529684 127 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 AL355375.2-201ENST00000574825 175 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 AC006380.1-201ENST00000603598 186 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 MIR1321-201ENST00000637766 79 ntBASIC0.11□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.361-201ENST00000365515 120 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 Y_RNA.368-201ENST00000365547 113 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 RNU6-373P-201ENST00000411247 98 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 MTCO3P10-201ENST00000455912 772 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 RNU6-864P-201ENST00000516256 108 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 AC004467.1-201ENST00000615678 330 ntBASIC0.1□□□□□ -2.39
UPK3BQ9BT76 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.1□□□□□ -2.39
UPK3BQ9BT76 SNORD115-30-201ENST00000364117 82 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNU6-934P-201ENST00000365154 107 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 Y_RNA.358-201ENST00000365491 99 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNU6-318P-201ENST00000384283 103 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 SNORD38C-201ENST00000384381 69 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 SNORD28B-201ENST00000390993 75 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.09□□□□□ -2.4
UPK3BQ9BT76 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNU6-329P-201ENST00000459618 107 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 SNORA25.12-201ENST00000516202 82 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNU6-566P-201ENST00000516790 107 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNA5SP330-201ENST00000517096 96 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 RNU2-12P-201ENST00000517216 168 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.09□□□□□ -2.4
UPK3BQ9BT76 MIR3612-201ENST00000579753 87 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 AP000770.2-201ENST00000623694 100 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 MIR3662-201ENST00000637030 95 ntBASIC0.09□□□□□ -2.4
UPK3BQ9BT76 MIR103A1-201ENST00000362165 78 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 RNA5SP457-201ENST00000363657 124 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 SNORD14E-201ENST00000364009 85 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 Y_RNA.258-201ENST00000364613 105 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 RNU6-679P-201ENST00000391003 106 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 SNORD12B-201ENST00000410433 91 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 SNORD83.1-201ENST00000411362 77 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 SNRPGP10-201ENST00000432323 225 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.08□□□□□ -2.4
UPK3BQ9BT76 RNU6-408P-201ENST00000515910 100 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 RNU6-1088P-201ENST00000516850 104 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 AC105029.1-201ENST00000520250 669 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 AC022523.2-201ENST00000561045 150 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 AC005972.2-201ENST00000604690 348 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 AC005014.2-201ENST00000607795 599 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 AC024614.3-201ENST00000637860 256 ntBASIC0.08□□□□□ -2.4
UPK3BQ9BT76 RNU6-369P-201ENST00000362515 102 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 SNORD44.1-201ENST00000363202 61 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 RNA5SP62-201ENST00000363457 110 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 SNORA72-201ENST00000384339 132 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 RNA5SP63-201ENST00000391225 112 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AL031003.1-201ENST00000404229 172 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 RNU2-54P-201ENST00000410299 190 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 SNORD71-201ENST00000411292 86 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AC074085.1-201ENST00000413598 418 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AC009161.1-201ENST00000417306 376 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AL139396.1-201ENST00000421137 167 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AL358176.2-201ENST00000425769 204 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.07□□□□□ -2.4
UPK3BQ9BT76 MTND1P1-201ENST00000445453 368 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 MTND1P17-201ENST00000448961 204 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 SNRPGP12-201ENST00000449481 213 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.07□□□□□ -2.4
UPK3BQ9BT76 NDUFA4P2-201ENST00000489989 244 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 AC116353.2-201ENST00000505332 712 ntBASIC0.07□□□□□ -2.4
UPK3BQ9BT76 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.07□□□□□ -2.4
UPK3BQ9BT76 Y_RNA.2-201ENST00000362330 96 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 RNU6-874P-201ENST00000362390 105 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 RNU6-580P-201ENST00000365159 107 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 RNU6-716P-201ENST00000365621 103 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
UPK3BQ9BT76 SNORD116-9-201ENST00000384000 95 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 SNORD116-3-201ENST00000384287 95 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 SNORD116-7-201ENST00000384404 95 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 SNORD116-5-201ENST00000384462 95 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 MIR518A1-201ENST00000385068 85 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 RNU6-1314P-201ENST00000517139 104 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.06□□□□□ -2.4
UPK3BQ9BT76 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.06□□□□□ -2.4
UPK3BQ9BT76 AP000753.3-201ENST00000604083 169 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 RBM11P1-201ENST00000604951 799 ntBASIC0.06□□□□□ -2.4
UPK3BQ9BT76 AC245008.1-201ENST00000608123 476 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms