Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 SNORA26.5-201ENST00000391215 123 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AL603910.2-201ENST00000407268 136 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 MIR1267-201ENST00000408723 78 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 EBAG9P1-201ENST00000418955 543 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 POLR2KP2-201ENST00000438155 177 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC069257.2-201ENST00000441819 155 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 snoU13.27-201ENST00000459278 104 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RPS26P45-201ENST00000471748 340 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RPS27P22-201ENST00000478056 241 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RPL36AP21-201ENST00000490372 323 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC091959.1-201ENST00000495857 238 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC010598.1-201ENST00000510378 103 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RNA5SP20-201ENST00000515976 84 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 RNA5SP481-201ENST00000516814 122 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.21□□□□□ -2.22
EBF4Q9BQW3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.21□□□□□ -2.22
EBF4Q9BQW3 MIR4438-201ENST00000585271 93 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC062037.2-201ENST00000610137 73 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 U6.73-201ENST00000619194 103 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
EBF4Q9BQW3 AC134026.1-201ENST00000623249 2239 ntBASIC1.21□□□□□ -2.22
EBF4Q9BQW3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
EBF4Q9BQW3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
EBF4Q9BQW3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNU1-22P-201ENST00000363334 158 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNU6-740P-201ENST00000364734 105 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNU6-702P-201ENST00000364982 107 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 MIR515-2-201ENST00000384883 83 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 MIR515-1-201ENST00000384884 83 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 SNORA12.1-201ENST00000390873 148 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNA5SP323-201ENST00000391094 133 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.2□□□□□ -2.22
EBF4Q9BQW3 AC010154.1-201ENST00000425857 269 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 snoU13.9-201ENST00000458927 103 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RPS26P55-201ENST00000471178 356 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 SERF1AP1-201ENST00000514575 187 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 SNORA31.10-201ENST00000516482 106 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 RNU2-31P-201ENST00000516954 155 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 AC024995.1-201ENST00000523014 93 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 AC006380.1-201ENST00000603598 186 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 AL359075.3-201ENST00000613288 217 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.2□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.136-201ENST00000363444 102 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 RNU4-10P-201ENST00000364383 140 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 RNU6-763P-201ENST00000390865 106 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 MIR873-201ENST00000401120 77 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 MTND4LP30-201ENST00000454092 297 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 AC097462.1-201ENST00000514125 324 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.19□□□□□ -2.22
EBF4Q9BQW3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
EBF4Q9BQW3 AL929325.1-201ENST00000603096 117 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 AC073413.2-201ENST00000604332 360 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 AC004832.4-201ENST00000608952 331 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 snoU18.1-201ENST00000629629 71 ntBASIC1.19□□□□□ -2.22
EBF4Q9BQW3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
EBF4Q9BQW3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
EBF4Q9BQW3 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 SNORD27-201ENST00000363981 72 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 RNU6-326P-201ENST00000365480 107 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 RNU6-855P-201ENST00000410395 104 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
EBF4Q9BQW3 RPS20P10-201ENST00000451209 253 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.18□□□□□ -2.22
EBF4Q9BQW3 RNU7-34P-201ENST00000459394 64 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AC091021.1-201ENST00000468051 388 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.18□□□□□ -2.22
EBF4Q9BQW3 SNORD116-28-201ENST00000516123 91 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 RNU1-142P-201ENST00000516682 145 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AL137100.2-201ENST00000555786 315 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AC015688.6-201ENST00000577737 104 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 MIR4303-201ENST00000581299 66 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 AL008718.3-201ENST00000610217 321 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 MIR8063-201ENST00000621930 81 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
EBF4Q9BQW3 ICE2P2-201ENST00000483823 2787 ntBASIC1.18□□□□□ -2.22
EBF4Q9BQW3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
EBF4Q9BQW3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms