Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR522-201ENST00000385071 87 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 MIR136-201ENST00000385207 82 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 Y_RNA.599-201ENST00000410489 109 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 MTND1P2-201ENST00000430604 821 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 MTCO3P10-201ENST00000455912 772 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 Y_RNA.653-201ENST00000459091 95 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 RNU6-436P-201ENST00000516171 114 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 RNA5SP255-201ENST00000516370 107 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 RNU6-966P-201ENST00000516479 104 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 SNORA74.3-201ENST00000517108 154 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 AC092794.1-201ENST00000612734 582 ntBASIC0.78□□□□□ -2.28
VPS35Q96QK1 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 Y_RNA.314-201ENST00000365114 102 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 SNORD14.1-201ENST00000365609 90 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 AC117470.1-201ENST00000381974 330 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 Y_RNA.474-201ENST00000384341 102 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 MIR15B-201ENST00000385045 98 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 MLLT10P1-201ENST00000418346 262 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS35Q96QK1 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 RNU6-559P-201ENST00000516151 98 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 MIR4659A-201ENST00000580269 81 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 U2.1-201ENST00000618978 145 ntBASIC0.77□□□□□ -2.29
VPS35Q96QK1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 MIR520C-201ENST00000385005 87 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 RNU7-41P-201ENST00000515917 61 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 SNORD45.4-201ENST00000516629 73 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 AC005972.2-201ENST00000604690 348 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 AC113139.1-201ENST00000605049 239 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 AC133104.2-201ENST00000615272 193 ntBASIC0.76□□□□□ -2.29
VPS35Q96QK1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS35Q96QK1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS35Q96QK1 RNU6-1084P-201ENST00000362498 107 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 SNORA25.3-201ENST00000363205 127 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 Y_RNA.146-201ENST00000363549 102 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 Y_RNA.230-201ENST00000364348 109 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 SNORA72-201ENST00000384339 132 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 RNU6-911P-201ENST00000516523 104 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 SNORA18.7-201ENST00000516910 131 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 AP003716.2-201ENST00000528260 108 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 U6.92-201ENST00000636464 89 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
VPS35Q96QK1 RNA5SP48-201ENST00000363969 126 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 snoU2-30.1-201ENST00000365012 70 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 RNU6-1297P-201ENST00000384415 104 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 MIR559-201ENST00000385188 96 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 RNU6-131P-201ENST00000391144 107 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 MIR1185-1-201ENST00000408598 86 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 Y_RNA.619-201ENST00000410951 90 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 AC006461.1-201ENST00000412637 326 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 AL390729.2-201ENST00000416137 156 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 AC099799.1-201ENST00000439809 192 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 HMGN2P32-201ENST00000444648 269 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 U8.19-201ENST00000459095 133 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 RPS29P1-201ENST00000465274 159 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 MIR4764-201ENST00000580680 88 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 AC022441.3-201ENST00000605737 136 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 SEPT14P17-201ENST00000617978 177 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 AC138305.3-201ENST00000624988 240 ntBASIC0.74□□□□□ -2.29
VPS35Q96QK1 Y_RNA.27-201ENST00000362540 103 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 RNU6-708P-201ENST00000384217 107 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 SNRPGP10-201ENST00000432323 225 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 RNU7-43P-201ENST00000516554 64 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 AC023827.1-201ENST00000569247 97 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 AC131055.1-201ENST00000584626 316 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 MIR6788-201ENST00000618842 66 ntBASIC0.73□□□□□ -2.29
VPS35Q96QK1 RNU6-490P-201ENST00000362985 107 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 Y_RNA.329-201ENST00000365209 107 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 RNU6-855P-201ENST00000410395 104 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 MCFD2P1-201ENST00000417812 300 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 AC096644.2-201ENST00000429278 159 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 SNORD123-201ENST00000459473 70 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 RN7SKP164-201ENST00000516138 266 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 RN7SKP295-201ENST00000517264 153 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 RBM11P1-201ENST00000604951 799 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 AC025253.1-201ENST00000613623 543 ntBASIC0.72□□□□□ -2.29
VPS35Q96QK1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS35Q96QK1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 Y_RNA.259-201ENST00000364619 101 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 SNORD50B-201ENST00000364995 70 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 RNU6-1175P-201ENST00000365200 107 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 Y_RNA.505-201ENST00000384489 102 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 RNU6-710P-201ENST00000410424 105 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 RNA5SP247-201ENST00000411181 105 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 AC098614.3-201ENST00000438957 440 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 Y_RNA.714-201ENST00000517065 90 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 AC109810.1-201ENST00000534066 224 ntBASIC0.71□□□□□ -2.3
VPS35Q96QK1 MTND4LP32-201ENST00000636111 270 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms