Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 Y_RNA.252-201ENST00000364556 101 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 RNY3P4-201ENST00000384428 101 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AL355796.1-201ENST00000406706 323 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 RPL39P39-201ENST00000455840 151 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AC010469.2-201ENST00000496412 480 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 RNU4-77P-201ENST00000516692 156 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
COL21A1Q96P44 RPL21P9-201ENST00000556149 474 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AC092447.9-201ENST00000603395 144 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AL080274.1-201ENST00000605565 220 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AC011476.5-201ENST00000615594 130 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 AC007742.2-201ENST00000618226 398 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 U6.92-201ENST00000636464 89 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 MIR3674-201ENST00000636576 68 ntBASIC0.8□□□□□ -2.28
COL21A1Q96P44 MIR369-201ENST00000362155 70 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 Y_RNA.80-201ENST00000362996 102 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 RNA5SP62-201ENST00000363457 110 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 Y_RNA.197-201ENST00000364004 102 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 SNORA2.2-201ENST00000365473 135 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 Y_RNA.394-201ENST00000383942 103 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 SNORA20B-201ENST00000384220 132 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 Y_RNA.485-201ENST00000384395 102 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 MIR628-201ENST00000385229 95 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 AL451046.2-201ENST00000403074 277 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 AC022028.1-201ENST00000412054 408 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.79□□□□□ -2.28
COL21A1Q96P44 AC018865.2-201ENST00000423631 129 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.79□□□□□ -2.28
COL21A1Q96P44 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
COL21A1Q96P44 RPS27P22-201ENST00000478056 241 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 SNORA31.2-201ENST00000516019 134 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 RNU6-976P-201ENST00000516086 111 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 RNU6-911P-201ENST00000516523 104 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 RNA5SP395-201ENST00000516567 118 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 RNU6-1012P-201ENST00000516606 109 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 RNA5SP476-201ENST00000516613 103 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 AC023157.2-201ENST00000540596 141 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.79□□□□□ -2.28
COL21A1Q96P44 MIR5188-201ENST00000583467 113 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 VN1R91P-201ENST00000594377 169 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 SNORD58B-201ENST00000607313 66 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 U6.115-201ENST00000636045 103 ntBASIC0.79□□□□□ -2.28
COL21A1Q96P44 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
COL21A1Q96P44 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.27-201ENST00000362540 103 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.31-201ENST00000362574 102 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.39-201ENST00000362620 98 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.61-201ENST00000362835 102 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.85-201ENST00000363014 111 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.124-201ENST00000363339 93 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 SNORD114-24-201ENST00000365029 72 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 SNORD42.2-201ENST00000365570 69 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 RNU6-308P-201ENST00000390957 107 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 SNORD78.2-201ENST00000391076 69 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 RNA5SP475-201ENST00000410568 110 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 AC245047.7-201ENST00000440265 293 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 AL137792.2-201ENST00000443484 235 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 FCF1P4-201ENST00000448326 183 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 Y_RNA.639-201ENST00000458981 102 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 RNU6-966P-201ENST00000516479 104 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 AC023442.1-201ENST00000531247 422 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
COL21A1Q96P44 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 MIR4659A-201ENST00000580269 81 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 AC004467.1-201ENST00000615678 330 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 AC007485.1-201ENST00000616755 206 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 uc_338.22-201ENST00000622722 187 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 MIR6079-201ENST00000635807 62 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 MTND4P29-201ENST00000503122 1372 ntBASIC0.78□□□□□ -2.28
COL21A1Q96P44 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
COL21A1Q96P44 SNORA27.1-201ENST00000362604 124 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 Y_RNA.101-201ENST00000363154 102 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 Y_RNA.813-201ENST00000364639 102 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU6-407P-201ENST00000365280 104 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU1-115P-201ENST00000365329 160 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 Y_RNA.395-201ENST00000383945 109 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU6-20P-201ENST00000384106 107 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 Y_RNA.535-201ENST00000384612 99 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL21A1Q96P44 AC063976.4-201ENST00000421971 163 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 MTND1P14-201ENST00000427400 950 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 STAG3L5P-204ENST00000443759 179 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 SUMO1P2-201ENST00000452524 304 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 AC097462.1-201ENST00000514125 324 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU6-1170P-201ENST00000515974 106 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU6-922P-201ENST00000516753 99 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 RNU2-12P-201ENST00000517216 168 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 AC005828.6-201ENST00000606610 232 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 AC006157.1-201ENST00000611750 366 ntBASIC0.77□□□□□ -2.29
COL21A1Q96P44 AC240442.1-201ENST00000616055 283 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 740.4 ms