Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU6-1310P-201ENST00000384153 107 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 MIR1185-1-201ENST00000408598 86 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 AC074085.1-201ENST00000413598 418 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 AL353997.1-201ENST00000432936 108 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 MTND5P5-201ENST00000503764 376 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.54□□□□□ -2.32
USP47Q96K76 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.54□□□□□ -2.32
USP47Q96K76 AC023932.2-201ENST00000603176 175 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
USP47Q96K76 Y_RNA.157-201ENST00000363638 102 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 Y_RNA.294-201ENST00000364916 102 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 MIR136-201ENST00000385207 82 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 RNA5SP63-201ENST00000391225 112 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 RNU6-1050P-201ENST00000410388 107 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 MLLT10P1-201ENST00000418346 262 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 HMGN1P10-201ENST00000474557 553 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 RNU6-1337P-201ENST00000516525 95 ntBASIC0.53□□□□□ -2.32
USP47Q96K76 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
USP47Q96K76 RNU6-1297P-201ENST00000384415 104 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 Y_RNA.573-201ENST00000384763 105 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 Y_RNA.594-201ENST00000410373 140 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 SNORD12B-201ENST00000410433 91 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 AC092423.1-201ENST00000430165 186 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.52□□□□□ -2.33
USP47Q96K76 SNORA18.7-201ENST00000516910 131 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 AC004467.1-201ENST00000615678 330 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 MIR6086-201ENST00000638065 55 ntBASIC0.52□□□□□ -2.33
USP47Q96K76 RNU6-1084P-201ENST00000362498 107 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 Y_RNA.450-201ENST00000384198 113 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 RNA5SP118-201ENST00000410385 109 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 AL390729.2-201ENST00000416137 156 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 RNU6-408P-201ENST00000515910 100 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 MIR4764-201ENST00000580680 88 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 MIR4762-201ENST00000585261 75 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 AC048344.4-201ENST00000619744 527 ntBASIC0.51□□□□□ -2.33
USP47Q96K76 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.5□□□□□ -2.33
USP47Q96K76 U8.5-201ENST00000364528 136 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 Y_RNA.274-201ENST00000364714 101 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 SNORD14.1-201ENST00000365609 90 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 AC098869.1-201ENST00000481627 292 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 RNA5SP285-201ENST00000516619 119 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 RNU6-1016P-201ENST00000516689 94 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 RNU6-94P-201ENST00000607728 107 ntBASIC0.5□□□□□ -2.33
USP47Q96K76 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.5□□□□□ -2.33
USP47Q96K76 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
USP47Q96K76 AC117470.1-201ENST00000381974 330 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 MTND2P22-201ENST00000444325 1033 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 RNU6-329P-201ENST00000459618 107 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.49□□□□□ -2.33
USP47Q96K76 SNORA25.10-201ENST00000515926 124 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 RNU6-1110P-201ENST00000516462 101 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 SNORD45.4-201ENST00000516629 73 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
USP47Q96K76 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.49□□□□□ -2.33
USP47Q96K76 SNORD115-30-201ENST00000364117 82 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 MIR522-201ENST00000385071 87 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 AC067940.1-201ENST00000458411 300 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 RPL7P42-201ENST00000481005 679 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 RN7SKP164-201ENST00000516138 266 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 RNU2-12P-201ENST00000517216 168 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 MIR1244-1-201ENST00000612829 85 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 MIR1244-3-201ENST00000635744 85 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 MIR1244-2-201ENST00000636449 85 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 MIR1244-4-202ENST00000636813 85 ntBASIC0.48□□□□□ -2.33
USP47Q96K76 RNU6-1301P-201ENST00000362724 104 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 Y_RNA.361-201ENST00000365515 120 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 Y_RNA.453-201ENST00000384223 109 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 RPS3AP52-201ENST00000435639 297 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 RPS29P25-201ENST00000481709 171 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 Y_RNA.708-201ENST00000516950 96 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 AC067863.3-201ENST00000624172 122 ntBASIC0.47□□□□□ -2.33
USP47Q96K76 RNU4-24P-201ENST00000364565 139 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 Y_RNA.471-201ENST00000384312 102 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 RNU6-510P-201ENST00000391239 108 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 MIR548K-201ENST00000408406 116 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 MIR548F5-201ENST00000408421 86 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 RNU7-43P-201ENST00000516554 64 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 AC055872.1-201ENST00000570978 278 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 AC006380.1-201ENST00000603598 186 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 AC092794.2-201ENST00000620933 563 ntBASIC0.46□□□□□ -2.34
USP47Q96K76 Y_RNA.172-201ENST00000363765 102 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 RNU6-961P-201ENST00000363893 105 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 Y_RNA.253-201ENST00000364562 112 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 RNU4-67P-201ENST00000364569 141 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 SNORD113.3-201ENST00000364630 78 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 RNU6-593P-201ENST00000364716 112 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 Y_RNA.404-201ENST00000383978 102 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 RNU6-1067P-201ENST00000384752 107 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 RNU6-1304P-201ENST00000411374 106 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 AC244098.3-201ENST00000424803 96 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 MTND3P10-201ENST00000450967 341 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
USP47Q96K76 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms