Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL606534.2-204ENST00000635008 178 ntBASIC1.35□□□□□ -2.19
SKA1Q96BD8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SKA1Q96BD8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SKA1Q96BD8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 RNU6-855P-201ENST00000410395 104 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 AC015922.2-201ENST00000435593 184 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.34□□□□□ -2.19
SKA1Q96BD8 RPS20P10-201ENST00000451209 253 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 RNU6-507P-201ENST00000516045 100 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 SNORD116-28-201ENST00000516123 91 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 Y_RNA.714-201ENST00000517065 90 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 AC093027.1-201ENST00000546698 429 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 MIR4423-201ENST00000580922 80 ntBASIC1.34□□□□□ -2.19
SKA1Q96BD8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.33□□□□□ -2.2
SKA1Q96BD8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.33□□□□□ -2.2
SKA1Q96BD8 Y_RNA.331-201ENST00000365267 102 ntBASIC1.33□□□□□ -2.2
SKA1Q96BD8 MT-TD-201ENST00000387419 68 ntBASIC1.33□□□□□ -2.2
SKA1Q96BD8 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
SKA1Q96BD8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.33□□□□□ -2.2
SKA1Q96BD8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SKA1Q96BD8 AC112487.2-201ENST00000637950 304 ntBASIC1.33□□□□□ -2.2
SKA1Q96BD8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 RNU1-124P-201ENST00000363861 145 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 Y_RNA.253-201ENST00000364562 112 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 Y_RNA.496-201ENST00000384444 101 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 MIR526A1-201ENST00000384897 85 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
SKA1Q96BD8 MLLT10P1-201ENST00000418346 262 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 MTND3P22-201ENST00000510932 243 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 SNORD111.1-201ENST00000516421 86 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 RNU6-966P-201ENST00000516479 104 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 RNU4-77P-201ENST00000516692 156 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 RNU7-116P-201ENST00000516940 62 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 AC011373.1-201ENST00000607270 237 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 AC104985.2-201ENST00000620598 500 ntBASIC1.32□□□□□ -2.2
SKA1Q96BD8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 Y_RNA.58-201ENST00000362807 102 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 Y_RNA.154-201ENST00000363624 102 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 RNY3P1-201ENST00000365085 102 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 RNY3-201ENST00000365484 102 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 Y_RNA.439-201ENST00000384119 94 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 snoU13.18-201ENST00000459483 104 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 RNU7-110P-201ENST00000516891 62 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 MIR4452-201ENST00000583004 71 ntBASIC1.31□□□□□ -2.2
SKA1Q96BD8 Y_RNA.315-201ENST00000365117 102 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 Y_RNA.341-201ENST00000365341 102 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 AF228730.4-201ENST00000421457 183 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.3□□□□□ -2.2
SKA1Q96BD8 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 Y_RNA.804-201ENST00000615262 101 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 AC091812.1-201ENST00000432235 1948 ntBASIC1.3□□□□□ -2.2
SKA1Q96BD8 Y_RNA.5-201ENST00000362334 102 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 RNU6-1323P-201ENST00000384025 107 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 Y_RNA.456-201ENST00000384232 111 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 SNORA80D-201ENST00000384488 135 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 MIR15B-201ENST00000385045 98 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 MIR522-201ENST00000385071 87 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 RNU6-131P-201ENST00000391144 107 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 MIR1298-201ENST00000408783 112 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 AC063976.4-201ENST00000421971 163 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 HMGN2P32-201ENST00000444648 269 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 U8.20-201ENST00000459445 131 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 SNORA25.10-201ENST00000515926 124 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.29□□□□□ -2.2
SKA1Q96BD8 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 AL078603.1-201ENST00000603824 313 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 AL008636.1-201ENST00000625038 1018 ntBASIC1.29□□□□□ -2.2
SKA1Q96BD8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SKA1Q96BD8 RNU4-50P-201ENST00000364361 141 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 snoU2-30.1-201ENST00000365012 70 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 RNU6-21P-201ENST00000384710 107 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 AC093852.1-201ENST00000503587 266 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 RNA5SP220-201ENST00000516298 104 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 SNORD45.4-201ENST00000516629 73 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 MIR4795-201ENST00000584182 89 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 AL050343.2-201ENST00000607338 280 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 MIR7111-201ENST00000619751 72 ntBASIC1.28□□□□□ -2.2
SKA1Q96BD8 RNU4-73P-201ENST00000363164 141 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 Y_RNA.197-201ENST00000364004 102 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 Y_RNA.368-201ENST00000365547 113 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 SNORD63-201ENST00000384262 68 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 RNY3P14-201ENST00000384309 102 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 RNU6-1170P-201ENST00000515974 106 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.27□□□□□ -2.21
SKA1Q96BD8 AC006157.1-201ENST00000611750 366 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 AC012676.2-201ENST00000619258 186 ntBASIC1.27□□□□□ -2.21
SKA1Q96BD8 Y_RNA.551-201ENST00000384661 102 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms