Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC108706.1-201ENST00000611053 297 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SNED1Q8TER0 AC068205.3-201ENST00000636385 468 ntBASIC1.91□□□□□ -2.1
SNED1Q8TER0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SNED1Q8TER0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SNED1Q8TER0 snoU2_19.1-201ENST00000362361 80 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 SNORA7.1-201ENST00000363750 139 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 RNU6-801P-201ENST00000364087 105 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 Y_RNA.441-201ENST00000384123 112 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 AC004866.1-201ENST00000411748 78 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 RPS20P10-201ENST00000451209 253 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 AC090515.1-201ENST00000465295 476 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 SNORD53B-201ENST00000577887 78 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
SNED1Q8TER0 RNU2-4P-201ENST00000606190 192 ntBASIC1.9□□□□□ -2.11
SNED1Q8TER0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
SNED1Q8TER0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SNED1Q8TER0 RNU6-312P-201ENST00000364629 107 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 Y_RNA.272-201ENST00000364696 102 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 Y_RNA.291-201ENST00000364886 113 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 SNORD50.2-201ENST00000365465 70 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 Y_RNA.357-201ENST00000365487 109 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 RNU6-763P-201ENST00000390865 106 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 AC136628.3-201ENST00000521868 290 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.89□□□□□ -2.11
SNED1Q8TER0 AC024614.2-201ENST00000577584 372 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 AL713866.2-201ENST00000603579 219 ntBASIC1.89□□□□□ -2.11
SNED1Q8TER0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.89□□□□□ -2.11
SNED1Q8TER0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SNED1Q8TER0 Y_RNA.182-201ENST00000363880 111 ntBASIC1.88□□□□□ -2.11
SNED1Q8TER0 SUMO2P18-201ENST00000518873 252 ntBASIC1.88□□□□□ -2.11
SNED1Q8TER0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.88□□□□□ -2.11
SNED1Q8TER0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.88□□□□□ -2.11
SNED1Q8TER0 AC134026.1-201ENST00000623249 2239 ntBASIC1.88□□□□□ -2.11
SNED1Q8TER0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.87□□□□□ -2.11
SNED1Q8TER0 Y_RNA.293-201ENST00000364908 93 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 SNORD116-18-201ENST00000383961 92 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 MIR517C-201ENST00000385103 95 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 Y_RNA.580-201ENST00000391004 95 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 SNORA12-201ENST00000391162 147 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 AL031003.1-201ENST00000404229 172 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 RNU6-710P-201ENST00000410424 105 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 RNU5E-9P-201ENST00000411164 104 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.87□□□□□ -2.11
SNED1Q8TER0 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 SNORA48.11-201ENST00000517015 89 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 DEFB131C-201ENST00000528817 165 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.87□□□□□ -2.11
SNED1Q8TER0 AC026271.5-201ENST00000577873 130 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 MIR4452-201ENST00000583004 71 ntBASIC1.87□□□□□ -2.11
SNED1Q8TER0 Y_RNA.75-201ENST00000362927 97 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 RNU6-1305P-201ENST00000364353 104 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 SNORD113-1-201ENST00000365321 69 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 RNU6-1130P-201ENST00000365434 107 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 RNU4-17P-201ENST00000365598 141 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 Y_RNA.374-201ENST00000365606 101 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 RNU6-449P-201ENST00000383914 107 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 RNU6-42P-201ENST00000384165 107 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 SNORA67.2-201ENST00000384300 149 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 MIR548B-201ENST00000385247 97 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 SNORA26.5-201ENST00000391215 123 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 RNA5SP504-201ENST00000410676 117 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 Y_RNA.797-201ENST00000515977 94 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.86□□□□□ -2.11
SNED1Q8TER0 AL078604.3-201ENST00000615580 211 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 AC013791.1-201ENST00000616619 62 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 MTND1P7-201ENST00000632801 297 ntBASIC1.86□□□□□ -2.11
SNED1Q8TER0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNED1Q8TER0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.85□□□□□ -2.11
SNED1Q8TER0 MIR96-201ENST00000362288 78 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 Y_RNA.121-201ENST00000363309 113 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 U3.8-201ENST00000363675 217 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 RNU6-81P-201ENST00000365608 104 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 Y_RNA.412-201ENST00000384001 104 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 Y_RNA.497-201ENST00000384447 98 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 RNU6-1081P-201ENST00000384537 107 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 SNORA67.6-201ENST00000391093 99 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 AL512604.1-201ENST00000404812 257 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 TOMM22P2-201ENST00000430735 237 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 SEPT7P4-201ENST00000437076 306 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 RPS29P29-201ENST00000456396 171 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.85□□□□□ -2.11
SNED1Q8TER0 SNORA31.24-201ENST00000517232 57 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 MIR4287-201ENST00000579398 78 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 RPL17P51-201ENST00000605218 238 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.85□□□□□ -2.11
SNED1Q8TER0 MIR6734-201ENST00000621166 68 ntBASIC1.85□□□□□ -2.11
SNED1Q8TER0 U6.115-201ENST00000636045 103 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms