Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LINC01399-202ENST00000458450 244 ntBASIC1.11□□□□□ -2.23
TRAF3IP1Q8TDR0 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.315-201ENST00000365117 102 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 AC117470.1-201ENST00000381974 330 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 PIGPP3-201ENST00000425307 415 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 RNU6-475P-201ENST00000516073 104 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 RNA5SP458-201ENST00000516188 119 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.713-201ENST00000517013 96 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 FAM106DP-201ENST00000586416 501 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 LARP7P1-201ENST00000605576 316 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 SNORD58B-201ENST00000607313 66 ntBASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAF3IP1Q8TDR0 RNU4-73P-201ENST00000363164 141 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 RNU7-116P-201ENST00000516940 62 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 MIR4795-201ENST00000584182 89 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 AL008636.1-201ENST00000625038 1018 ntBASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TRAF3IP1Q8TDR0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 SNORD81.1-201ENST00000363064 77 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR1298-201ENST00000408783 112 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 RNU6-855P-201ENST00000410395 104 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 AC024067.1-201ENST00000426199 223 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 MTATP6P23-201ENST00000440153 476 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 U8.20-201ENST00000459445 131 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 HMGN1P7-201ENST00000491722 313 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 AP001094.1-201ENST00000579805 193 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR4769-201ENST00000584126 77 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 AC011373.1-201ENST00000607270 237 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 RNY1P14-201ENST00000384426 108 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 SNORA80D-201ENST00000384488 135 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.551-201ENST00000384661 102 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.579-201ENST00000390939 94 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 AL096861.1-201ENST00000610899 123 ntBASIC1.07□□□□□ -2.24
TRAF3IP1Q8TDR0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.395-201ENST00000383945 109 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.439-201ENST00000384119 94 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 SNORD111.1-201ENST00000516421 86 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 AP003357.1-201ENST00000604497 148 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 AL133255.1-201ENST00000606374 441 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 AL391903.3-201ENST00000612158 163 ntBASIC1.06□□□□□ -2.24
TRAF3IP1Q8TDR0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.80-201ENST00000362996 102 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 RNU4-50P-201ENST00000364361 141 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR15B-201ENST00000385045 98 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR1302-11-201ENST00000408051 138 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR1302-9-201ENST00000408365 138 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR1302-10-201ENST00000408734 138 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 MTND4LP11-201ENST00000422184 280 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 HMGN2P32-201ENST00000444648 269 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 HMGN1P10-201ENST00000474557 553 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 SNORD45.4-201ENST00000516629 73 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 SNORA74.3-201ENST00000517108 154 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 DEFB117-201ENST00000602356 141 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 AL080274.1-201ENST00000605565 220 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR1302-2-201ENST00000607096 138 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 AC091895.1-201ENST00000624494 256 ntBASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAF3IP1Q8TDR0 AL442644.1-201ENST00000454390 3105 ntBASIC1.04□□□□□ -2.24
TRAF3IP1Q8TDR0 MIR136-201ENST00000385207 82 ntBASIC1.04□□□□□ -2.24
TRAF3IP1Q8TDR0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAF3IP1Q8TDR0 AC245047.8-201ENST00000456455 284 ntBASIC1.04□□□□□ -2.24
TRAF3IP1Q8TDR0 RPS26P48-201ENST00000491713 339 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms